Gene TBFG_11220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11220 
Symbol 
ID5221897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1343114 
End bp1344289 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content69% 
IMG OID640605974 
ProductPPE family protein 
Protein accessionYP_001287165 
Protein GI148822411 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones317 
Plasmid unclonability p-value0.540836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones236 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGATT TCGGGGCGTT ACCACCGGAG ATCAACTCCG CGAGGATGTA TGCCGGCCCG 
GGTTCGGCCT CGCTGGTGGC CGCCGCGAAG ATGTGGGACA GCGTGGCGAG TGACCTGTTT
TCGGCCGCGT CGGCGTTTCA GTCGGTGGTC TGGGGTCTGA CGGTGGGGTC GTGGATAGGT
TCGTCGGCGG GTCTGATGGT GGCGGCGGCC TCGCCGTATG TGGCGTGGAT GAGCGTCACC
GCGGGGCAGG CCGAGCTGAC CGCCGCCCAG GTCCGGGTTG CTGCGGCGGC CTACGAGACG
GCGTATGGGC TGACGGTGCC CCCGCCGGTG ATCGCCGAGA ACCGTGCTGA ACTGATGATT
CTGATAGCGA CCAACCTCTT GGGGCAAAAC ACCCCGGCGA TCGCGGTCAA CGAGGCCGAA
TACGGCGAGA TGTGGGCCCA AGACGCCGCC GCGATGTTTG GCTACGCCGC GGCGACGGCG
ACGGCGACGG CGACGTTGCT GCCGTTCGAG GAGGCGCCGG AGATGACCAG CGCGGGTGGG
CTCCTCGAGC AGGCCGCCGC GGTCGAGGAG GCCTCCGACA CCGCCGCGGC GAACCAGTTG
ATGAACAATG TGCCCCAGGC GCTGCAACAG CTGGCCCAGC CCACGCAGGG CACCACGCCT
TCTTCCAAGC TGGGTGGCCT GTGGAAGACG GTCTCGCCGC ATCGGTCGCC GATCAGCAAC
ATGGTGTCGA TGGCCAACAA CCACATGTCG ATGACCAACT CGGGTGTGTC GATGACCAAC
ACCTTGAGCT CGATGTTGAA GGGCTTTGCT CCGGCGGCGG CCGCCCAGGC CGTGCAAACC
GCGGCGCAAA ACGGGGTCCG GGCGATGAGC TCGCTGGGCA GCTCGCTGGG TTCTTCGGGT
CTGGGCGGTG GGGTGGCCGC CAACTTGGGT CGGGCGGCCT CGGTCGGTTC GTTGTCGGTG
CCGCAGGCCT GGGCCGCGGC CAACCAGGCA GTCACCCCGG CGGCGCGGGC GCTGCCGCTG
ACCAGCCTGA CCAGCGCCGC GGAAAGAGGG CCCGGGCAGA TGCTGGGCGG GCTGCCGGTG
GGGCAGATGG GCGCCAGGGC CGGTGGTGGG CTCAGTGGTG TGCTGCGTGT TCCGCCGCGA
CCCTATGTGA TGCCGCATTC TCCGGCGGCC GGCTAG
 
Protein sequence
MVDFGALPPE INSARMYAGP GSASLVAAAK MWDSVASDLF SAASAFQSVV WGLTVGSWIG 
SSAGLMVAAA SPYVAWMSVT AGQAELTAAQ VRVAAAAYET AYGLTVPPPV IAENRAELMI
LIATNLLGQN TPAIAVNEAE YGEMWAQDAA AMFGYAAATA TATATLLPFE EAPEMTSAGG
LLEQAAAVEE ASDTAAANQL MNNVPQALQQ LAQPTQGTTP SSKLGGLWKT VSPHRSPISN
MVSMANNHMS MTNSGVSMTN TLSSMLKGFA PAAAAQAVQT AAQNGVRAMS SLGSSLGSSG
LGGGVAANLG RAASVGSLSV PQAWAAANQA VTPAARALPL TSLTSAAERG PGQMLGGLPV
GQMGARAGGG LSGVLRVPPR PYVMPHSPAA G