| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11213 |
|---|
| Symbol | sigI |
|---|
| ID | 5221890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 1335857 |
|---|
| End bp | 1336729 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640605967 |
|---|
| Product | RNA polymerase sigma factor SigI |
|---|
| Protein accession | YP_001287158 |
|---|
| Protein GI | 148822404 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 285 |
|---|
| Plasmid unclonability p-value | 0.000108208 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 251 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAC ACGACCCGGT AAGTGCGGCC TGGCGGGCGC ATCGGGCCTA CCTGGTGGAC
CTCGCGTTTC GTATGGTAGG TGACATCGGC GTGGCCGAAG ACATGGTGCA AGAGGCATTT
TCCCGCTTGC TGCGGGCTCC GGTCGGCGAC ATCGACGACG AGCGTGGCTG GCTGATCGTG
GTCACCAGCC GGCTGTGCCT GGATCACATC AAGTCGGCGT CGACACGCCG GGAGCGCCCG
CAGGACATCG CCGCATGGCA CGACGGTGAC GCCAGCGTGT CATCGGTTGA CCCGGCTGAC
CGGGTGACTC TCGACGACGA GGTCCGGCTG GCTTTGCTGA TCATGCTCGA GCGCCTCGGC
CCCGCGGAGC GGGTGGTGTT CGTGCTGCAC GAGATCTTTG GGCTGCCCTA CCAGCAAATC
GCCACGACGA TTGGCAGCCA GGCCTCCACA TGCCGGCAGC TGGCTCATCG GGCCCGTCGC
AAGATCAACG AATCGCGCAT TGCGGCCAGC GTGGAGCCAG CCCAGCATCG CGTCGTCACC
AGAGCTTTCA TCGAAGCCTG CTCCAACGGA GACCTGGACA CCCTGCTCGA GGTGCTGGAT
CCGGGTGTCG CCGGCGAGAT CGACGCCCGC AAAGGCGTTG TCGTCGTGGG CGCGGATCGG
GTTGGCCCGA CCATCCTGCG CCACTGGAGT CACCCCGCCA CCGTCCTGGT AGCCCAGCCG
GTGTGCGGTC AACCGGCGGT GCTGGCCTTT GTCAACCGAG CGCTTGCCGG CGTGTTGGCC
CTGTCGATCG AGGCCGGCAA GATCACAAAA ATCCATGTCT TAGTGCAGCC TTCAACATTG
GACCCGTTAC GGGCCGAACT CGGCGGCGGT TAG
|
|---|
| Protein sequence | MSQHDPVSAA WRAHRAYLVD LAFRMVGDIG VAEDMVQEAF SRLLRAPVGD IDDERGWLIV
VTSRLCLDHI KSASTRRERP QDIAAWHDGD ASVSSVDPAD RVTLDDEVRL ALLIMLERLG
PAERVVFVLH EIFGLPYQQI ATTIGSQAST CRQLAHRARR KINESRIAAS VEPAQHRVVT
RAFIEACSNG DLDTLLEVLD PGVAGEIDAR KGVVVVGADR VGPTILRHWS HPATVLVAQP
VCGQPAVLAF VNRALAGVLA LSIEAGKITK IHVLVQPSTL DPLRAELGGG
|
|---|
| |