| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11200 |
|---|
| Symbol | |
|---|
| ID | 5221877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1309966 |
|---|
| End bp | 1311990 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640605954 |
|---|
| Product | NADPH dependent 2,4-dienoyl-CoA reductase fadH |
|---|
| Protein accession | YP_001287145 |
|---|
| Protein GI | 148822391 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 238 |
|---|
| Plasmid unclonability p-value | 0.248388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 268 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATC CATACCCAAA TCTGCTGTCC CCGTTGGACC TTGGGTTTAC CACGCTGCGC
AACCGGGTGG TTATGGGTTC GATGCACACC GGACTGGAAG ACCGGGCCCG CCATATCGAT
CGGCTCGCCG ACTACTTCGC CGAACGTGCA CGCGGCGGCG TCGGGCTGAT CATCACCGGT
GGCTACGCGC CCAACCGCAC CGGATGGCTG CTGCCGTTCG CCTCCGAACT CGTCACTTCG
GCGCAAGCCC GACGGCACCG CCGAATCACC AGGGCGGTCC ACGATTCGGG TGCAAAGATC
CTGCTGCAAA TCCTGCACGC CGGACGCTAC GCCTACCACC CACTTGCGGT CAGCGCCTCG
CCGATCAAGG CGCCGATCAC CCCGTTTCGT CCGCGAGCAC TATCGGCTCG CGGGGTCGAA
GCGACCATCG CGGATTTCGC CCGCTGCGCG CAGTTGGCCC GCGATGCCGG CTACGACGGC
GTCGAAATCA TGGGCAGCGA AGGGTATCTG CTCAATCAGT TCCTGGCGCC GCGCACCAAC
AAGCGCACCG ACTCGTGGGG CGGCACACCG GCCAACCGTC GCCGGTTCCC GGTCGAGATC
ATCCGACGCA GCCGCGCCGC CGTCGGATCC GACTTCATCA TCTGTTACCG GCTGTCAATG
GCCGACTACG TTGCAGAAGG CCAGAGTTGG GATGAAATCG TCGCGCTGGC AACCGAAGTG
GAAGGGGCAG GCGCAACCAT CATCAACTCC GGCTTCGGCT GGCACGAGGC CCGGGTGCCC
ACTATCGTCA CCTCAGTGCC GGGCGGCGCG TTTGTCGACA TCAGCAGCGC CGTCGCCGAA
CACGTCACTA TCCCGGTGGT GGCGTCCAAC CGGATCAACA TGCCGCAGGC CGCGGAACGG
ATTCTGGCCG AAACCCAGGT GCGGCTGATA TCAATGGCCC GGCCGATGCT GAGCGACCCG
GACTGGGTGC TCAAGGCGCA GTCCAATCGG GTCGACGAAA TCAACACCTG CATCTCCTGC
AATCAAGCCT GCCTGGACCA CGCATTTGCC AGGAAAACGG TGTCGTGTCT GCTCAATCCA
CGCGCCGGGC GCGAGACGCA GTTGGTGCTG TCCCCGACCC GGCGCGCCCG CTCGGTGGCC
GTCGTCGGGG CTGGACCAGC CGGGCTGGCC ACGGCGGCCA ACGCCGCGCA ACGGGGTCAC
CGGGTCACGC TGTTCGAGGC CAACGACTTT ATCGGTGGAC AGTTTGACAT GGCCCGCCGC
ATTCCCGGCA AAGAGGAATT CAGCGAAACC ATCCGGTATT TCTCGACGAT TCTGGCCAAA
CACGGTGTCG AGGTGCGACT GGGCACTCGG GTGGCCGCCC AGGAGTTGAC CGGCTACGAC
GAGGTCGTCT TGGCCACCGG CGTGGCACCG CGCATTCCGG CCATCCCCGG CATCGACCAC
CCCATGGTGT TAACCTACGC CGAAGCCATC ACCGGTGTCA GACCGGTCGG GCGAACCGTG
GCTGTCGTCG GCGCCGGCGG CATTGGCTTC GACGTCACCG AACTGCTGGT CACCGACTCC
TCACCCACCC TCAACCTCAA AGAGTGGAAG GCCGAATGGG GGGTCGCTGA TCCGCGAGAA
GCCCGCGGAG CGTTGACGAC TCCACTGCCG GCGCCGCCCG CCCGTGAGGT GTACCTACTG
CAGCGCACCA AAGGCCCGCA GGGCAAGCGG CTCGGCAAGA CCACCGGATG GGTCCACCGG
GCGTCGTTGA AGGCCAAGGG CGTTCATCAG CTGTCTGGGG TGAACTACGA ACAGATCAAC
GACGACGGCC TACACATCAG CTTCGGCCCG AAGCGCAGGC GGCCCCAGCT GCTGGCGGTG
GACAACGTAG TGGTCTGCGC CGGCCAGGAA CCGGTGCGAG ATCTGGAGAG TGAACTGCGC
CGGCACGGCA TTAACCCGCA CATCATCGGT GGCGCGGCGG TTGCCGCTGA GTTGGACGCC
AAGCGCGCCA TCAAGCAAGG CACCGAACTT GCGGCCAGGC TATAA
|
|---|
| Protein sequence | MTNPYPNLLS PLDLGFTTLR NRVVMGSMHT GLEDRARHID RLADYFAERA RGGVGLIITG
GYAPNRTGWL LPFASELVTS AQARRHRRIT RAVHDSGAKI LLQILHAGRY AYHPLAVSAS
PIKAPITPFR PRALSARGVE ATIADFARCA QLARDAGYDG VEIMGSEGYL LNQFLAPRTN
KRTDSWGGTP ANRRRFPVEI IRRSRAAVGS DFIICYRLSM ADYVAEGQSW DEIVALATEV
EGAGATIINS GFGWHEARVP TIVTSVPGGA FVDISSAVAE HVTIPVVASN RINMPQAAER
ILAETQVRLI SMARPMLSDP DWVLKAQSNR VDEINTCISC NQACLDHAFA RKTVSCLLNP
RAGRETQLVL SPTRRARSVA VVGAGPAGLA TAANAAQRGH RVTLFEANDF IGGQFDMARR
IPGKEEFSET IRYFSTILAK HGVEVRLGTR VAAQELTGYD EVVLATGVAP RIPAIPGIDH
PMVLTYAEAI TGVRPVGRTV AVVGAGGIGF DVTELLVTDS SPTLNLKEWK AEWGVADPRE
ARGALTTPLP APPAREVYLL QRTKGPQGKR LGKTTGWVHR ASLKAKGVHQ LSGVNYEQIN
DDGLHISFGP KRRRPQLLAV DNVVVCAGQE PVRDLESELR RHGINPHIIG GAAVAAELDA
KRAIKQGTEL AARL
|
|---|
| |