| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11038 |
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| Symbol | |
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| ID | 5221714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 1142735 |
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| End bp | 1146439 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640605791 |
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| Product | transcription-repair coupling factor mfd |
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| Protein accession | YP_001286983 |
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| Protein GI | 148822229 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 109 |
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| Plasmid unclonability p-value | 0.970521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 205 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CGGGGCCTGC CTGCTCAGAT ACCCCGATCG CGGGGCTCGT CGAATTGGCG
CTGAGCGCGC CGACATTCCA ACAGCTCATG CAGCGCGCCG GGGGTCGACC CGACGAATTG
ACGCTCATCG CGCCGGCCAG CGCGCGGCTG TTGGTCGCCA GTGCGCTGGC TCGGCAGGGG
CCATTGCTGG TGGTCACCGC CACCGGGCGG GAAGCCGACG ACCTGGCCGC CGAACTGCGT
GGTGTGTTCG GGGATGCGGT GGCGTTGTTG CCGTCCTGGG AGACACTGCC GCACGAACGG
CTCTCACCCG GTGTTGACAC CGTCGGCACT CGCCTGATGG CGCTGCGCCG GCTGGCCCAC
CCCGACGATG CCCAGCTGGG CCCACCGCTG GGGGTAGTGG TGACCTCGGT GCGCTCGCTG
CTGCAGCCCA TGACGCCGCA GCTGGGCATG ATGGAGCCCC TCACGCTGAC CGTTGGCGAC
GAATCCCCCT TCGACGGCGT GGTGGCGCGG CTGGTCGAGC TGGCATATAC CCGGGTGGAT
ATGGTCGGCC GGCGCGGCGA GTTCGCTGTG CGCGGCGGGA TTCTGGACAT CTTTGCCCCG
ACGGCCGAAC ATCCGGTGCG GGTCGAGTTC TGGGGCGACG AGATCACCGA GATGCGGATG
TTCTCGGTAG CCGACCAGCG CTCGATTCCG GAGATCGACA TTCACACACT GGTTGCCTTC
GCCTGCCGTG AACTGCTGCT GAGCGAGGAC GTGCGGGCGC GGGCCGCCCA ACTGGCCGCA
CGGCATCCCG CGGCCGAGAG CACCGTCACC GGCAGTGCTT CCGACATGCT GGCGAAGCTC
GCCGAGGGCA TCGCGGTCGA CGGCATGGAG GCGGTGTTGC CGGTGCTCTG GTCCGACGGG
CACGCGTTGC TGACCGATCA GCTGCCCGAC GGCACGCCGG TGTTGGTGTG CGACCCGGAA
AAGGTGCGCA CCCGCGCCGC GGATCTGATC AGGACTGGCC GTGAATTCCT GGAAGCCTCG
TGGTCGGTCG CGGCGCTGGG AACTGCAGAA AATCAAGCCC CCGTCGACGT CGAACAACTG
GGTGGGTCGG GGTTCGTCGA ACTGGACCAG GTGCGGGCCG CGGCGGCCCG AACGGGTCAT
CCGTGGTGGA CGTTGAGCCA ATTGTCCGAC GAGTCGGCGA TCGAGTTGGA CGTTCGGGCC
GCGCCGTCGG CGCGCGGGCA CCAGCGTGAC ATCGACGAAA TCTTCGCGAT GCTACGTGCC
CACATCGCGA CCGGCGGGTA CGCCGCGCTG GTCGCGCCGG GCACCGGAAC CGCACACCGC
GTGGTGGAAC GGCTGTCCGA GTCCGACACC CCCGCGGGGA TGCTCGATCC CGGCCAGGCG
CCCAAGCCGG GAGTCGTCGG GGTGCTCCAG GGCCCGCTGC GTGACGGCGT CATCATTCCC
GGCGCCAACC TGGTCGTCAT CACCGAGACC GATTTGACCG GCAGCCGGGT CAGCGCCGCC
GAGGGCAAGC GGCTGGCGGC CAAGCGGCGC AACATCGTCG ACCCGCTGGC GCTGACGGCC
GGTGACCTGG TGGTGCACGA TCAGCACGGC ATCGGCCGGT TCGTGGAGAT GGTCGAGCGC
ACGGTCGGGG GCGCCCGCCG GGAGTATCTG GTGCTGGAGT ATGCCTCGGC CAAGAGGGGT
GGCGGGGCGA AAAATACTGA CAAGCTCTAT GTCCCGATGG ATTCGCTGGA CCAGCTGTCG
CGGTATGTCG GCGGGCAGGC GCCGGCGCTG AGCCGGCTGG GCGGCAGCGA CTGGGCCAAC
ACCAAGACCA AGGCGCGCCG CGCGGTGCGC GAGATCGCGG GCGAGCTGGT CTCGCTGTAC
GCCAAACGGC AGGCCAGCCC CGGGCATGCG TTCTCGCCGG ACACGCCGTG GCAGGCCGAG
CTGGAGGACG CGTTCGGCTT CACCGAGACC GTGGACCAGC TCACCGCCAT CGAAGAGGTC
AAGGCGGACA TGGAAAAGCC GATCCCGATG GACCGGGTGA TCTGCGGCGA TGTCGGCTAC
GGCAAGACCG AGATCGCGGT GCGGGCGGCG TTCAAGGCGG TCCAAGACGG TAAACAGGTC
GCGGTGCTGG TGCCCACCAC GCTGCTGGCC GACCAGCATC TGCAGACGTT CGGCGAGCGA
ATGTCCGGAT TCCCGGTGAC CATCAAGGGT CTGTCGCGGT TCACCGACGC CGCCGAGTCC
CGCGCCGTGA TCGACGGCCT GGCCGACGGG TCGGTGGACA TCGTGATCGG CACCCATCGG
CTGCTGCAGA CCGGGGTGCG CTGGAAGGAT CTGGGCCTGG TGGTGGTCGA CGAGGAGCAG
CGGTTCGGCG TCGAGCACAA GGAGCACATC AAGTCACTGC GCACCCATGT CGACGTGCTG
ACCATGAGCG CCACCCCGAT CCCGCGCACG TTGGAGATGA GCCTGGCCGG GATTCGCGAG
ATGTCGACCA TCCTGACGCC GCCCGAGGAG CGCTACCCGG TGCTGACCTA CGTCGGACCG
CACGACGACA AGCAGATCGC CGCGGCGCTG CGCCGGGAGC TGCTGCGCGA CGGGCAGGCG
TTCTACGTGC ACAACCGGGT CAGCTCGATC GACGCGGCCG CCGCCCGGGT GCGTGAGCTG
GTGCCCGAGG CGCGGGTGGT GGTCGCGCAC GGGCAGATGC CCGAGGACCT GTTGGAGACC
ACCGTGCAAC GGTTCTGGAA CCGCGAGCAT GACATCCTGG TTTGCACCAC CATCGTGGAG
ACCGGCCTGG ACATCTCCAA CGCCAACACT TTGATCGTCG AGCGCGCCGA TACCTTCGGG
CTGTCCCAGC TGCACCAGCT GCGTGGCCGG GTGGGCCGCA GCCGGGAGCG CGGCTACGCC
TATTTCCTCT ATCCACCGCA GGTGCCGCTG ACCGAGACCG CTTACGACCG GTTGGCGACG
ATCGCGCAGA ACAATGAGCT GGGCGCGGGC ATGGCCGTGG CGTTGAAGGA CCTAGAGATC
CGCGGTGCCG GCAACGTGCT CGGCATCGAG CAGTCCGGAC ACGTCGCCGG CGTCGGATTC
GACCTGTACG TGCGGTTGGT CGGCGAGGCC CTGGAGACGT ACCGGGACGC GTACCGGGCG
GCCGCCGACG GCCAAACCGT GAGGACCGCC GAAGAACCCA AGGATGTGCG AATCGACCTG
CCCGTTGACG CGCACCTGCC ACCGGACTAC ATCGCCAGTG ATCGGCTGCG GCTGGAGGGC
TACCGGCGGC TGGCGGCCGC CTCCTCTGAT CGCGAAGTGG CGGCCGTTGT GGACGAGCTC
ACCGATCGGT ATGGGGCCCT GCCGGAGCCG GCCCGGCGGC TGGCGGCGGT GGCACGGCTG
CGGCTGCTGT GCCGTGGCTC CGGCATCACC GACGTGACGG CGGCGTCGGC AGCGACCGTG
CGGCTGTCCC CGTTGACGCT GCCGGACTCC GCCCAGGTGC GGCTGAAGCG AATGTATCCC
GGAGCGCACT ACCGTGCCAC GACGGCCACC GTGCAGGTTC CCATTCCGCG AGCCGGTGGC
CTCGGCGCGC CGCGAATCCG CGACGTCGAG CTGGTTCAGA TGGTGGCCGA TTTGATAACC
GCGCTCGCTG GGAAACCGCG CCAGCATATT GGTATAACGA ACCCTAGCCC GCCAGGCGAA
GACGGCCGTG GTCGCAACAC GACGATTAAG GAGCGACAAC CGTGA
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| Protein sequence | MTAPGPACSD TPIAGLVELA LSAPTFQQLM QRAGGRPDEL TLIAPASARL LVASALARQG
PLLVVTATGR EADDLAAELR GVFGDAVALL PSWETLPHER LSPGVDTVGT RLMALRRLAH
PDDAQLGPPL GVVVTSVRSL LQPMTPQLGM MEPLTLTVGD ESPFDGVVAR LVELAYTRVD
MVGRRGEFAV RGGILDIFAP TAEHPVRVEF WGDEITEMRM FSVADQRSIP EIDIHTLVAF
ACRELLLSED VRARAAQLAA RHPAAESTVT GSASDMLAKL AEGIAVDGME AVLPVLWSDG
HALLTDQLPD GTPVLVCDPE KVRTRAADLI RTGREFLEAS WSVAALGTAE NQAPVDVEQL
GGSGFVELDQ VRAAAARTGH PWWTLSQLSD ESAIELDVRA APSARGHQRD IDEIFAMLRA
HIATGGYAAL VAPGTGTAHR VVERLSESDT PAGMLDPGQA PKPGVVGVLQ GPLRDGVIIP
GANLVVITET DLTGSRVSAA EGKRLAAKRR NIVDPLALTA GDLVVHDQHG IGRFVEMVER
TVGGARREYL VLEYASAKRG GGAKNTDKLY VPMDSLDQLS RYVGGQAPAL SRLGGSDWAN
TKTKARRAVR EIAGELVSLY AKRQASPGHA FSPDTPWQAE LEDAFGFTET VDQLTAIEEV
KADMEKPIPM DRVICGDVGY GKTEIAVRAA FKAVQDGKQV AVLVPTTLLA DQHLQTFGER
MSGFPVTIKG LSRFTDAAES RAVIDGLADG SVDIVIGTHR LLQTGVRWKD LGLVVVDEEQ
RFGVEHKEHI KSLRTHVDVL TMSATPIPRT LEMSLAGIRE MSTILTPPEE RYPVLTYVGP
HDDKQIAAAL RRELLRDGQA FYVHNRVSSI DAAAARVREL VPEARVVVAH GQMPEDLLET
TVQRFWNREH DILVCTTIVE TGLDISNANT LIVERADTFG LSQLHQLRGR VGRSRERGYA
YFLYPPQVPL TETAYDRLAT IAQNNELGAG MAVALKDLEI RGAGNVLGIE QSGHVAGVGF
DLYVRLVGEA LETYRDAYRA AADGQTVRTA EEPKDVRIDL PVDAHLPPDY IASDRLRLEG
YRRLAAASSD REVAAVVDEL TDRYGALPEP ARRLAAVARL RLLCRGSGIT DVTAASAATV
RLSPLTLPDS AQVRLKRMYP GAHYRATTAT VQVPIPRAGG LGAPRIRDVE LVQMVADLIT
ALAGKPRQHI GITNPSPPGE DGRGRNTTIK ERQP
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