| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11001 |
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| Symbol | |
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| ID | 5221675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 1102835 |
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| End bp | 1104229 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640605752 |
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| Product | serine protease pepD |
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| Protein accession | YP_001286946 |
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| Protein GI | 148822192 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 243 |
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| Plasmid unclonability p-value | 0.000053367 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 198 |
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| Fosmid unclonability p-value | 0.424973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TGGCCCGAGT AGTGGGCCTA GTACAGGAAG AGCAACCTAG CGACATGACG
AATCACCCAC GGTATTCGCC ACCGCCGCAG CAGCCGGGAA CCCCAGGTTA TGCTCAGGGG
CAGCAGCAAA CGTACAGCCA GCAGTTCGAC TGGCGTTACC CACCGTCCCC GCCCCCGCAG
CCAACCCAGT ACCGTCAACC CTACGAGGCG TTGGGTGGTA CCCGGCCGGG TCTGATACCT
GGCGTGATTC CGACCATGAC GCCCCCTCCT GGGATGGTTC GCCAACGCCC TCGTGCAGGC
ATGTTGGCCA TCGGCGCGGT GACGATAGCG GTGGTGTCCG CCGGCATCGG CGGCGCGGCC
GCATCCCTGG TCGGGTTCAA CCGGGCACCC GCCGGCCCCA GCGGCGGCCC AGTGGCTGCC
AGCGCGGCGC CAAGCATCCC CGCAGCAAAC ATGCCGCCGG GGTCGGTCGA ACAGGTGGCG
GCCAAGGTGG TGCCCAGTGT CGTCATGTTG GAAACCGATC TGGGCCGCCA GTCGGAGGAG
GGCTCCGGCA TCATTCTGTC TGCCGAGGGG CTGATCTTGA CCAACAACCA CGTGATCGCG
GCGGCCGCCA AGCCTCCCCT GGGCAGTCCG CCGCCGAAAA CGACGGTAAC CTTCTCTGAC
GGGCGGACCG CACCCTTCAC GGTGGTGGGG GCTGACCCCA CCAGTGATAT CGCCGTCGTC
CGTGTTCAGG GCGTCTCCGG GCTCACCCCG ATCTCCCTGG GTTCCTCCTC GGACCTGAGG
GTCGGTCAGC CGGTGCTGGC GATCGGGTCG CCGCTCGGTT TGGAGGGCAC CGTGACCACG
GGGATCGTCA GCGCTCTCAA CCGTCCAGTG TCGACGACCG GCGAGGCCGG CAACCAGAAC
ACCGTGCTGG ACGCCATTCA GACCGACGCC GCGATCAACC CCGGTAACTC CGGGGGCGCG
CTGGTGAACA TGAACGCTCA ACTCGTCGGA GTCAACTCGG CCATTGCCAC GCTGGGCGCG
GACTCAGCCG ATGCGCAGAG CGGCTCGATC GGTCTCGGTT TTGCGATTCC AGTCGACCAG
GCCAAGCGCA TCGCCGACGA GTTGATCAGC ACCGGCAAGG CGTCACATGC CTCCCTGGGT
GTGCAGGTGA CCAATGACAA AGACACCCCG GGCGCCAAGA TCGTCGAAGT AGTGGCCGGT
GGTGCTGCCG CGAACGCTGG AGTGCCGAAG GGCGTCGTTG TCACCAAGGT CGACGACCGC
CCGATCAACA GCGCGGACGC GTTGGTTGCC GCCGTGCGGT CCAAAGCGCC GGGCGCCACG
GTGGCGCTAA CCTTTCAGGA TCCCTCGGGC GGTAGCCGCA CAGTGCAAGT CACCCTCGGC
AAGGCGGAGC AGTGA
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| Protein sequence | MAKLARVVGL VQEEQPSDMT NHPRYSPPPQ QPGTPGYAQG QQQTYSQQFD WRYPPSPPPQ
PTQYRQPYEA LGGTRPGLIP GVIPTMTPPP GMVRQRPRAG MLAIGAVTIA VVSAGIGGAA
ASLVGFNRAP AGPSGGPVAA SAAPSIPAAN MPPGSVEQVA AKVVPSVVML ETDLGRQSEE
GSGIILSAEG LILTNNHVIA AAAKPPLGSP PPKTTVTFSD GRTAPFTVVG ADPTSDIAVV
RVQGVSGLTP ISLGSSSDLR VGQPVLAIGS PLGLEGTVTT GIVSALNRPV STTGEAGNQN
TVLDAIQTDA AINPGNSGGA LVNMNAQLVG VNSAIATLGA DSADAQSGSI GLGFAIPVDQ
AKRIADELIS TGKASHASLG VQVTNDKDTP GAKIVEVVAG GAAANAGVPK GVVVTKVDDR
PINSADALVA AVRSKAPGAT VALTFQDPSG GSRTVQVTLG KAEQ
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