Gene TBFG_10962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10962 
Symbol 
ID5221636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1058073 
End bp1058834 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID640605713 
Productshort chain dehydrogenase 
Protein accessionYP_001286907 
Protein GI148822153 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones430 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones196 
Fosmid unclonability p-value0.247015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCG GAGTGACTCG CCAGAAGATC CTGATCACCG GCGCCAGTTC CGGCCTGGGC 
GCCGGGATGG CCCGATCCTT CGCCGCCCAG GGCCGCGACC TGGCGCTCTG CGCCCGCCGC
ACGGATCGGC TGACCGAACT GAAAGCCGAA CTGTCGCAAC GGTATCCCGA CATCAAGATC
GCTGTCGCGG AGCTGGACGT CAACGACCAC GAGCGGGTGC CCAAGGTATT CGCCGAACTC
AGCGATGAGA TTGGCGGCAT TGACCGTGTG ATCGTCAACG CCGGAATCGG CAAGGGTGCC
CGGCTGGGCT CGGGCAAGCT GTGGGCGAAC AAGGCAACCA TCGAAACCAA CCTGGTCGCC
GCACTCGTGC AGATCGAAAC GGCACTGGAC ATGTTCAACC AGCGCGGTTC GGGGCATTTG
GTGCTCATCT CCTCAGTGCT CGGCGTCAAA GGGGTGCCGG GCGTCAAAGC CGCGTATGCG
GCAAGCAAAG CCGGTGTGCG CTCGCTAGGC GAATCGCTGC GCGCCGAGTA CGCCCAACGC
CCCATCAGGG TCACGGTGCT GGAGCCGGGT TATATCGAGT CGGAGATGAC GGCCAAATCG
GCGAGCACAA TGTTGATGGT GGACAACGCA ACTGGCGTCA AGGCGCTGGT GGCCGCCATC
GAGCGCGAGC CCGGACGCGC CGCGGTCCCC TGGTGGCCAT GGGCGCCACT GGTGCGGCTG
ATGTGGGTGC TGCCGCCGCG GCTGACCAGA CGCTTCGCCT AG
 
Protein sequence
MLTGVTRQKI LITGASSGLG AGMARSFAAQ GRDLALCARR TDRLTELKAE LSQRYPDIKI 
AVAELDVNDH ERVPKVFAEL SDEIGGIDRV IVNAGIGKGA RLGSGKLWAN KATIETNLVA
ALVQIETALD MFNQRGSGHL VLISSVLGVK GVPGVKAAYA ASKAGVRSLG ESLRAEYAQR
PIRVTVLEPG YIESEMTAKS ASTMLMVDNA TGVKALVAAI EREPGRAAVP WWPWAPLVRL
MWVLPPRLTR RFA