Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10945 |
Symbol | |
ID | 5221619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 1037666 |
End bp | 1038457 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640605696 |
Product | short chain dehydrogenase |
Protein accession | YP_001286890 |
Protein GI | 148822136 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 500 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 239 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTGG ATATGTTCCG TCTTGACGAC AAGGTTGCCG TCATCACCGG CGGCGGCCGC GGCCTGGGAG CAGCCATCGC ATTGGCTTTC GCCCAGGCCG GCGCGGATGT CCTCATCGCT TCACGAACAT CATCCGAGCT TGACGCTGTC GCCGAACAGA TCCGCGCTGC CGGCCGCCGC GCCCACACCG TTGCCGCCGA TCTGGCCCAT CCCGAGGTGA CCGCGCAGCT GGCTGGTCAG GCCGTCGGAG CTTTCGGGAA GCTCGACATC GTCGTCAACA ACGTTGGCGG CACCATGCCC AACACGCTGC TAAGCACCTC GACCAAGGAC CTCGCGGACG CCTTCGCCTT CAACGTGGGC ACCGCCCACG CGCTGACCGT CGCGGCGGTG CCGTTGATGC TGGAACACTC CGGCGGCGGC AGCGTGATCA ACATCAGCTC CACCATGGGC CGGCTGGCGG CGCGGGGTTT CGCCGCCTAC GGCACCGCCA AGGCCGCACT GGCCCACTAC ACCCGGCTGG CGGCGCTGGA CCTGTGCCCA CGCGTCCGGG TCAATGCGAT CGCGCCGGGT TCCATCCTGA CCTCGGCGCT GGAGGTGGTA GCCGCCAACG ACGAGCTGCG TGCGCCGATG GAGCAGGCGA CACCACTGCG CCGGCTCGGT GACCCCGTCG ACATTGCAGC TGCGGCAGTG TATTTGGCCT CTCCGGCGGG CAGCTTCCTG ACCGGCAAGA CGTTGGAGGT CGACGGCGGA CTCACCTTCC CCAATCTCGA CCTTCCCATT CCGGACCTGT GA
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Protein sequence | MILDMFRLDD KVAVITGGGR GLGAAIALAF AQAGADVLIA SRTSSELDAV AEQIRAAGRR AHTVAADLAH PEVTAQLAGQ AVGAFGKLDI VVNNVGGTMP NTLLSTSTKD LADAFAFNVG TAHALTVAAV PLMLEHSGGG SVINISSTMG RLAARGFAAY GTAKAALAHY TRLAALDLCP RVRVNAIAPG SILTSALEVV AANDELRAPM EQATPLRRLG DPVDIAAAAV YLASPAGSFL TGKTLEVDGG LTFPNLDLPI PDL
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