Gene TBFG_10890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10890 
Symbol 
ID5221563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp974329 
End bp976281 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content63% 
IMG OID640605640 
Productacyl-CoA dehydrogenase fadE10 
Protein accessionYP_001286835 
Protein GI148822081 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones194 
Plasmid unclonability p-value0.00000443357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones200 
Fosmid unclonability p-value0.855053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGC AAACTCAGGT CACCGAGGAG CAAGCGCGGG CCCTTGCCGA GGAATCTCGC 
GAAAGTGGTT GGGATAAACC GTCCTTCGCC AAAGAACTCT TTCTGGGCCG CTTTCCCTTA
GGGCTCATAC ACCCATTTCC CAAGCCGTCG GACGCCGAGG AGGCCCGAAC CGAGGCGTTT
CTGGTCAAAC TGCGGGAATT CCTCGACACC GTGGACGGCA GCGTCATCGA GCGTGCTGCC
CAGATCCCCG ACGAGTACGT GAAAGGCCTG GCCGAGCTGG GCTGTTTCGG CTTGAAGATT
CCGTCCGAGT ACGGCGGGTT GAACATGTCG CAAGTCGCCT ACAACCGCGT GCTGATGATG
GTCACGACGG TTCATTCCAG TCTTGGCGCG TTGTTGTCGG CGCATCAGTC GATCGGGGTA
CCTGAACCGC TCAAGCTTGC CGGGACTGCG GAACAGAAGC GGCGGTTCCT ACCGCGGTGT
GCGGCCGGCG CGATATCGGC CTTTTTACTA ACCGAACCCG ATGTGGGCTC CGATCCGGCG
CGCATGGCAT CGACGGCGAC GCCGATCGAT GACGGCCAGG CTTACGAGCT TGAGGGTGTG
AAGTTGTGGA CCACCAACGG TGTGGTAGCG GACCTGCTAG TGGTTATGGC GCGGGTACCG
CGCAGTGAAG GGCACCGAGG GGGAATCAGC GCCTTTGTCG TCGAGGCTGA TTCGCCCGGG
ATCACCGTGG AGCGGCGCAA CAAGTTCATG GGACTGCGTG GCATCGAAAA CGGCGTGACC
CGGCTTCATC GCGTCAGGGT GCCCAAAGAC AACTTGATCG GCAGGGAAGG CGACGGTCTG
AAGATCGCGC TGACCACACT CAACGCCGGA CGGCTGTCCC TACCGGCGAT CGCAACCGGA
GTTGCGAAAC AGGCGCTGAA GATAGCGCGG GAATGGTCCG TCGAGCGAGT GCAATGGGGC
AAGCCGGTTG GCCAACATGA AGCGGTAGCC AGCAAGATCT CGTTCATTGC CGCCACCAAT
TACGCGCTCG ATGCGGTGGT CGAGCTGTCC AGTCAGATGG CCGACGAAGG CCGCAACGAC
ATCCGGATCG AGGCTGCGCT GGCTAAATTG TGGTCCAGTG AGATGGCCTG CCTGGTTGGC
GATGAGTTGC TACAGATCCG CGGTGGCCGC GGATACGAGA CCGCCGAATC CCTCGCCGCG
CGCGGTGAGC GGGCGGTACC AGTGGAGCAG ATGGTGCGGG ACCTGCGGAT CAACCGGATC
TTCGAAGGGT CCAGTGAGAT CATGCGGCTG CTCATCGCGC GTGAAGCGGT CGACGCGCAC
CTCACTGCCG CGGGTGATCT GGCGAACCCT AAGGCCGATC TGCGGCAGAA GGCCGCGGCG
GCGGCCGGCG CCAGCGGGTT CTACGCGAAG TGGTTGCCGA AGCTGGTTTT CGGCGAAGGC
CAACTACCCA CGACGTACCG CGAGTTCGGC GCCCTGGCGA CACATCTGCG TTTTGTCGAA
CGCTCGTCAC GCAAATTGGC CCGCAACACC TTCTACGGGA TGGCGCGCTG GCAGGCCAGC
CTGGAGAAAA AGCAAGGGTT CCTCGGCCGC ATCGTGGATA TCGGCGCCGA GCTATTCGCC
ATCTCCGCGG CGTGTGTGCG CGCCGAGGCG CAGCGAACGG CCGATCCGGT CGAGGGTGAG
CAGGCATACG AACTGGCCGA GGCGTTCTGC CAGCAGGCCA CGTTGCGGGT GGAGGCGCTG
TTCGACGCGT TGTGGTCCAA CACCGACAGC ATCGACGTTC GGCTGGCAAA CGATGTGCTG
GAGGGCCGCT ACACCTGGCT GGAGCAAGGG ATACTCGATC AGTCCGAAGG CACCGGACCG
TGGATCGCGT CCTGGGAACC GGGTCCATCC ACCGAGGCCA ATCTGGCTCG GCGGTTCTTG
ACGGTGTCGC CATCGAGCGA AGCGAAACTT TAG
 
Protein sequence
MAQQTQVTEE QARALAEESR ESGWDKPSFA KELFLGRFPL GLIHPFPKPS DAEEARTEAF 
LVKLREFLDT VDGSVIERAA QIPDEYVKGL AELGCFGLKI PSEYGGLNMS QVAYNRVLMM
VTTVHSSLGA LLSAHQSIGV PEPLKLAGTA EQKRRFLPRC AAGAISAFLL TEPDVGSDPA
RMASTATPID DGQAYELEGV KLWTTNGVVA DLLVVMARVP RSEGHRGGIS AFVVEADSPG
ITVERRNKFM GLRGIENGVT RLHRVRVPKD NLIGREGDGL KIALTTLNAG RLSLPAIATG
VAKQALKIAR EWSVERVQWG KPVGQHEAVA SKISFIAATN YALDAVVELS SQMADEGRND
IRIEAALAKL WSSEMACLVG DELLQIRGGR GYETAESLAA RGERAVPVEQ MVRDLRINRI
FEGSSEIMRL LIAREAVDAH LTAAGDLANP KADLRQKAAA AAGASGFYAK WLPKLVFGEG
QLPTTYREFG ALATHLRFVE RSSRKLARNT FYGMARWQAS LEKKQGFLGR IVDIGAELFA
ISAACVRAEA QRTADPVEGE QAYELAEAFC QQATLRVEAL FDALWSNTDS IDVRLANDVL
EGRYTWLEQG ILDQSEGTGP WIASWEPGPS TEANLARRFL TVSPSSEAKL