Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10848 |
Symbol | |
ID | 5221521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 927872 |
End bp | 930076 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 640605598 |
Product | PE-PGRS family protein |
Protein accession | YP_001286793 |
Protein GI | 148822039 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1.9382499999999997e-51 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 139 |
Fosmid unclonability p-value | 0.00000106302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGATCGGCA ACGGCGGGGC CGGCGGGTCC GGGGCGCCCG GCGCCATCGG TGGGGCCGGC GGGCCCGCGG GGTTGATCGG TGTCGGAGGT GCCGGCGGGG CCGGTGGAGA CTCCGCGGTC GCGGGTGTCA TCGGAGGGGC CGGTGGGGCA GGCGGGGCTG CCCTGCTGTT CGGTGCCGGT GGGGCCGGCG GGGCCGGGGG TTCCGGCGGT TCCGGCGCAG CTGGTGGGGC CGGTGGCGCC GGTGGGGCCG GCGGGCTGTT CGCCAGCGGC GGCAGCGGCG GGTTCGGCGG GTTCGCATCG ACGGGCACCG GTGGGGCCGG CGGCACCGGT GGGGCTGGTG GGTTGTTCGC CAGCGGCGGG GTCGGCGGTA CTGGCGGGGG AGCCGGGTCC GGCGGTACCG GTGGGGTTGG TGGGACGGGT GGGGCCGGAG GGCTGTTCGC TAGCGGCGGC GCTGGCGGGG CCGGCGGGTC CGGCGGTACC GGTGGGGCTG GTGGGACGGG TGGGGCCGGC GGGCTGTTCG GAGCCGGTGG CGCTGGCGGG CTCGGCGGGC AAGGCAACCA CACCGGCGGG CACGGTGGGG CCGGTGGCAG CGCCGGCCTG CTCGCCCTTG GCGACGGCGG CGCTGGCGGG GCCGGCGGGG CCGCTACCAC CGGAACCGGC GGGGCCGGCG GGGCGGGTGG CAAGGCCGGC CTGCTGTTCG GCTCCGGTGG GGCCGGTGGG TCCGGTGGGG CTGCCGGCAC CTTCGGTGAC ACCGGTAACT CCGGCGGGGC CGGTGGGGCG GGTGGCAAGG CCGGCCTGCT GTTCGGCTCC GGTGGGGCCG GTGGGTCCGG CGGCGCTGGG GGCTTCGCCA ACGGCTCTAC CGGCGGTGCC GGCGGGGCCG GCGGCGGGGC CGGGCTGATC GGCAACGGCG GCAACGGTGG CAGCGGCGGC ACGTCGGTTG CCACCGGGGG GGCCGGGAAC GGCGGTGCCG GCGGCGCCGG CGGCGGGGCC GGGCTGATCG GCAACGGCGG CAACGGCGGC AGTGGCGGAA TGGGCGATGC CCCGGGCGGC ACCGGCGTCG GCGGCATCGG TGGGCTGTTG TTGGGTTTGG ACGGCGCCAA CGCCCCGGCC AGCACCAACC CGCTGCACAC CGCGCAGCAG CAGGCGTTGG CCGCAGTCAA CGCGCCCATC CAGGCCGTGA CCGGGCGCCC GCTGATCGGC AACGGCGCCA ACGGCGCCCC GGGCAGCGGG GCCCCCGGCG GGCACGGCGG GTGGTTGTTC GGCGGCGGAG GGACCGGCGG GTCCGGCGTC AGCGGCGGGG CGGGCGGAGA TGGCGGGGCC GGCGGGATCT TGTTCGGCGC CGGCGGGGCC GGCGGCGCGG GCGGGGCCGT CACGGGAACC GGCGCCACCG GCGGGTCCGG TGGGGCCGGC GGTGGAGCCT TGCTGTTTGG GGCCGGTGGG GCCGGTGGAG CCGGCGGGTC CAGCGGGATT GGCGGGTTCG CCGCGGGCGG GGCCGGTGGG CCCGGAGGGG CCGGTGGGCT GTTCAACGGC GGCGGGGCCG GCGGGGCCGG CGGGGCCGGT GGCCTGTTCG CCGGTGGCGG GGCCGGCGGG GCCGGCGGAT CGGGCAACAA CGTCGGGGGG GCCGGCGGGG CCGGTGGGGT CGGTGGGCTG TTCGGGGCCG GCGGGGCCGG CGGATCCGGC GGCGGCGGTA GCGTTGCTGG CGACGGTGGG GCCGGCGGCA ACGCGGGCTT GCTCGCCCCC GGTCTCGCCG GCGGTGCCGG CGGTGGCGGC GGGCAGGGTT TTGACACCGG CGGGGCCGGC GGGCCCGGCG GCGACGCCGG CCTGCTGGTC GGCTCCGGCG GGGTCGGAGG TGCCGGCGGA TTCGGCCTCA CTACGGGTGG GCCTGGGGCG GCCGGCGGCG ACGCCGGCCT GCTGTTCGGC TCCGGCGGCG CTGGCGGGGC CGGCGGCTCC GGCCGAACCG ACCTCGGCGG CGCTGGCGGG GCCGGCGGCA AGGCCGGGCT GATCGGCAAC GGCGGTAACG GCGGGGCCGG CGGGGCCGGC GGGAACGGCG GCGGGGACGG CGGGCCCGGT GGAGCCGCCT TCGGGCTCGG TAACGGCGGC AACGGCGGCA ACGGGGGGAC CGGCACGTCC GCGGGCAGCC CCGGTGCCGG CGGCGCCGGT GGTTCGCTGA TCGGCGCGGA GGGGCTGCCC GGGCTGCTGC CCTAG
|
Protein sequence | MIGNGGAGGS GAPGAIGGAG GPAGLIGVGG AGGAGGDSAV AGVIGGAGGA GGAALLFGAG GAGGAGGSGG SGAAGGAGGA GGAGGLFASG GSGGFGGFAS TGTGGAGGTG GAGGLFASGG VGGTGGGAGS GGTGGVGGTG GAGGLFASGG AGGAGGSGGT GGAGGTGGAG GLFGAGGAGG LGGQGNHTGG HGGAGGSAGL LALGDGGAGG AGGAATTGTG GAGGAGGKAG LLFGSGGAGG SGGAAGTFGD TGNSGGAGGA GGKAGLLFGS GGAGGSGGAG GFANGSTGGA GGAGGGAGLI GNGGNGGSGG TSVATGGAGN GGAGGAGGGA GLIGNGGNGG SGGMGDAPGG TGVGGIGGLL LGLDGANAPA STNPLHTAQQ QALAAVNAPI QAVTGRPLIG NGANGAPGSG APGGHGGWLF GGGGTGGSGV SGGAGGDGGA GGILFGAGGA GGAGGAVTGT GATGGSGGAG GGALLFGAGG AGGAGGSSGI GGFAAGGAGG PGGAGGLFNG GGAGGAGGAG GLFAGGGAGG AGGSGNNVGG AGGAGGVGGL FGAGGAGGSG GGGSVAGDGG AGGNAGLLAP GLAGGAGGGG GQGFDTGGAG GPGGDAGLLV GSGGVGGAGG FGLTTGGPGA AGGDAGLLFG SGGAGGAGGS GRTDLGGAGG AGGKAGLIGN GGNGGAGGAG GNGGGDGGPG GAAFGLGNGG NGGNGGTGTS AGSPGAGGAG GSLIGAEGLP GLLP
|
| |