| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10522 |
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| Symbol | |
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| ID | 5221186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 605964 |
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| End bp | 607661 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640605263 |
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| Product | uroporphyrin-III C-methyltransferase hemD |
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| Protein accession | YP_001286467 |
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| Protein GI | 148821713 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 315 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 211 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAG GGCGTAAGCC GAGACCGGGC CGCATCGTTT TCGTGGGCTC CGGTCCGGGC
GACCCCGGCT TGCTTACGAC ACGGGCTGCC GCGGTGCTGG CCAACGCCGC GCTGGTGTTC
ACCGATCCCG ACGTACCGGA GCCGGTGGTG GCGCTGATCG GCACGGATCT GCCCCCCGTG
TCCGGCCCGG CGCCCGCCGA GCCGGTTGCC GGGAACGGCG ATGCGGCCGG CGGAGGAAGT
GCGCAGGAAC ACGGCCGGGC CGCGTCCGCG GTAGTCTCCG GTGGTCCTGA CATCCGCCCG
GCGCTGGGCG ATCCCGCCGA TGTGGCCAAG ACGCTGACCG CCGAGGCCCG TTCGGGTGTC
GACGTGGTGC GGCTGGTGGC GGGCGATCCG CTCACGGTGG ATGCGGTAAT CAGCGAGGTG
AACGCCGTCG CACGCACCCA CCTGCACATC GAAATCGTGC CCGGCCTGGC CGCCAGCAGC
GCGGTCCCGA CCTATGCCGG GTTGCCGCTG GGTTCGTCGC ACACCGTCGC CGACGTGCGT
ATCGACCCCG AAAACACCGA CTGGGACGCG CTGGCTGCCG CACCCGGGCC GCTGATCCTG
CAGGCCACCG CATCGCATCT AGCCGAATCG GCCCGCAGCC TGATCGATCA CCAGCTGGCC
GAGTCCACTC CGTGCGTGGT GACCGCACAC GGCACCACCT GTCAGCAGCG TTCGGTCGAG
ACCACACTTC AGGGATTGAC CGACCCGGCC GTCCTGGGCG CTACCGACCC CGCGTGCTCC
GCAAACGGGA GGGACTCCCA GGCCGGACCG CTGATAGTGA CCATCGGCAA GACGGTGACC
AGTCGGGCAA AGCTGAACTG GTGGGAGAGC CGCGCCCTCT ACGGCTGGAC GGTGTTGGTG
CCGCGCACCA AGGACCAGGC CGGCGAGATG AGCGAGCGGC TCACGTCGTA CGGCGCGCTG
CCGGTGGAGG TGCCGACCAT CGCCGTCGAG CCGCCGCGCA GCCCCGCGCA GATGGAGCGC
GCCGTCAAGG GCCTGGTCGA TGGCCGATTC CAGTGGATCG TGTTCACCTC CACCAACGCG
GTGCGTGCGG TGTGGGAGAA GTTCGGCGAG TTCGGTCTGG ATGCCCGCGC GTTCTCCGGG
GTGAAGATCG CCTGTGTCGG CGAGTCGACG GCCGACCGGG TGCGCGCCTT CGGAATCAGT
CCCGAGCTGG TGCCCTCCGG GGAGCAGTCC TCGCTTGGCT TGCTAGACGA CTTCCCGCCC
TACGACAGCG TTTTCGACCC GGTGAACCGG GTTTTGCTGC CGCGCGCCGA CATCGCCACC
GAAACGCTGG CCGAGGGACT GCGAGAGCGT GGCTGGGAGA TCGAGGACGT CACCGCCTAC
CGGACCGTGC GGGCCGCGCC GCCGCCGGCC ACTACCCGGG AAATGATCAA GACGGGCGGG
TTTGACGCGG TATGTTTCAC CTCCAGCTCG ACGGTGCGAA ACCTGGTCGG CATCGCCGGC
AAGCCGCACG CGCGGACGAT CATCGCCTGC ATAGGGCCAA AGACCGCCGA GACCGCAGCC
GAGTTCGGCT TGCGGGTCGA TGTCCAGCCG GACACCGCCG CCATCGGCCC GCTGGTCGAT
GCGCTGGCCG AGCATGCCGC CCGGTTGCGC GCTGAGGGTG CGCTGCCCCC GCCGCGCAAG
AAGAGCCGCA GGCGCTAG
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| Protein sequence | MTRGRKPRPG RIVFVGSGPG DPGLLTTRAA AVLANAALVF TDPDVPEPVV ALIGTDLPPV
SGPAPAEPVA GNGDAAGGGS AQEHGRAASA VVSGGPDIRP ALGDPADVAK TLTAEARSGV
DVVRLVAGDP LTVDAVISEV NAVARTHLHI EIVPGLAASS AVPTYAGLPL GSSHTVADVR
IDPENTDWDA LAAAPGPLIL QATASHLAES ARSLIDHQLA ESTPCVVTAH GTTCQQRSVE
TTLQGLTDPA VLGATDPACS ANGRDSQAGP LIVTIGKTVT SRAKLNWWES RALYGWTVLV
PRTKDQAGEM SERLTSYGAL PVEVPTIAVE PPRSPAQMER AVKGLVDGRF QWIVFTSTNA
VRAVWEKFGE FGLDARAFSG VKIACVGEST ADRVRAFGIS PELVPSGEQS SLGLLDDFPP
YDSVFDPVNR VLLPRADIAT ETLAEGLRER GWEIEDVTAY RTVRAAPPPA TTREMIKTGG
FDAVCFTSSS TVRNLVGIAG KPHARTIIAC IGPKTAETAA EFGLRVDVQP DTAAIGPLVD
ALAEHAARLR AEGALPPPRK KSRRR
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