Gene TBFG_10410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10410 
Symbol 
ID5221074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp488901 
End bp493109 
Gene Length4209 bp 
Protein Length1402 aa 
Translation table11 
GC content59% 
IMG OID640605151 
Productmembrane bound polyketide synthase pks6 
Protein accessionYP_001286355 
Protein GI148821601 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones106 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones197 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG GTTCGGTCAC TGCGGATAAG CTTCAAAAAT GGTTTCGAGA GTACTTGTCC 
ACGCATATCG AGTGTCATCC AAATGAGGTC AGCCTAGACG TTCCGATTAG AGATTTAGGT
TTGAAATCGA TTGATGTCTT AGCGATTCCC GGCGACCTCG GTGACAGATT TGGGTTTTGT
ATTCCCGATT TGGCCGTTTG GGATAATCCT AGCGCTAATG ATTTGATTGA TAGTCTGTTG
AACCAGCGTA GTGCTGACTC GTTAAGAGAG AGTCATGGAC ACGCCGACAG GAACACGCAG
GGTCGGGGCA GCATAAACGA GCCGGTTGCG GTCATCGGAG TGGGCTGTCG ATTTCCGGGA
GATATTGACG GCCCGGAACG GCTATGGGAC TTTCTGACCG AGAAGAAGTG TGCGATAACA
GCGTATCCAG ATCGTGGGTT CACGAATGCT GGAACTTTCG CGGAGTCCGG AGGCTTTTTA
AAGGATGTCG CGGGTTTCGA TAATAGATTT TTTGATATCC CGCCGGACGA GGCTCTGCGA
ATGGATCCGC AACAACGGTT GTTACTGGAG GTCTCTTGGG AAGCGTTAGA GCATGCAGGA
ATTATTCCTG AGTCATTAAG ACTTTCACGT ACGGGCGTAT TCGTTGGGGT GTCGTCAACT
GACTACGTCC GGCTTGTGTC AGCTAGCGCT CAGCAAAAGT CTACTATTTG GGATAACACC
GGCGGTTCTT CGAGTATTAT TGCCAATAGA ATCTCATACT TTCTCGATAT TCAGGGTCCG
TCCATTGTCA TTGACACGGC ATGCTCGTCA TCCCTGGTCG CCGTGCATCT AGCCTGTCGA
AGTCTCAGTA CCTGGGACTG CGATATCGCA CTTGTCGGTG GGACGAATGT TCTTATTTCA
CCAGAACCAT GGGGTGGGTT TAGGGAAGCG GGCATCTTGT CGCAGACAGG CTGCTGTCAC
GCGTTCGATA AATCCGCCGA CGGGATGGTA CGCGGTGAGG GATGCGGAGT TATCGTGCTG
CAGCGCCTCA GTGATGCACG CCTTGAGGGC CGGCGGATAT TAGCGATTCT GACGGGTTCA
GCGGTCAATC AGGACGGTAA GTCCAACGGT ATTATGGCGC CAAATCCTAG TGCGCAAATT
GGTGTTCTTG AAAATGCATG CAAGAGCGCT CGCGTCGATC CGCTGGAAAT CGGCTACGTC
GAGGCCCACG GGACCGGAAC GTCGTTAGGG GATAGGATCG AGGCGCACGC CTTAGGCATG
GTCTTTGGTC GCAAGAGACC GGGATCTGGG CCCCTGATGA TCGGGAGCAT CAAGCCGAAT
ATCGGCCATC TGGAAGGTGC GGCTGGCATC GCCGGATTGA TCAAGGCGGT GTTGATGGTT
GAGCGTGGCT CGCTGCTTCC GAGCGGGGGG TTTACGGAGC CAAATCCAGC TATCCCATTC
ACGGAATTGG GCCTGAGAGT TGTAGACGAA CTTCAGGAGT GGCCGGTGGT GGCGGGTCGG
CCGCGCCGGG CTGGGGTGTC ATCGTTCGGC TTTGGCGGCA CCAATGCGCA TGTGATTGTC
GAGGAAGCTG GTTCGGTTGG GGCGGACACG GTTTCGGGCC GCGCGGATGT TGGCGGTTCC
GGTGGTGGGG TGGTGGCGTG GGTGATTTCG GGGAAGACGG CTTCGGCGTT GGCTGCTCAG
GCGGGTCGGT TGGGGCGGTA TGTGCGGGCT CGGCCGGCGC TTGATGTTGT TGATGTGGGG
TATTCGTTGG TGAGCACGCG GTCGGTGTTT GATCATCGGG CGGTGGTGGT CGGCCAGACT
CGCGATGAGT TGCTGGCTGG GTTGGCTGGG GTGGTTGCTG GTCGGCCGGA GGCTGGGGTG
GTCTGCGGTG TTGGCAAGCC GGCGGGCAAG ACGGCTTTTG TGTTTGCCGG TCAGGGCTCG
CAGTGGCTGG GTATGGGTAG CGAGCTTTAT GCTGCCTACC CGGTTTTCGC CGAGGCCCTC
GATGCTGTGG TGGACGAGTT GGACCGGCAC CTGCGGTATC CGCTGCGCGA TGTGATCTGG
GGGCACGACC AAGATCTGTT GAATACCACC GAATTCGCCC AGCCGGCGCT GTTTGCGGTG
GAGGTGGCGC TGTATCGGCT GCTCATGTCG TGGGGGGTGC GGCCGGGTTT GGTGCTGGGT
CATTCGGTGG GCGAGTTGGC CGCGGCGCAC GTCGCCGGGG CGCTGTGTTT GCCGGATGCG
GCGATGCTGG TGGCCGCGCG TGGACGGTTG ATGCAGGCGT TGCCCGCCGG CGGCGCCATG
TTTGCGGTGC AGGCCCGTGA AGACGAGGTA GCGCCGATGC TGGGGCACGA TGTGAGCATC
GCGGCGGTCA ATGGTCCGGC TTCGGTGGTG ATCTCTGGTG CCCACGATGC GGTGAGCGCG
ATCGCTGATC GGCTGCGCGG CCAGGGCCGT CGGGTCCACC GGTTGGCGGT CTCGCATGCC
TTTCACTCGG CGTTGATGGA GCCGATGATC GCTGAGTTCA CAGCCGTTGC GGCCGAACTG
TCTGTGGGCT TGCCCACGAT CCCGGTCATT TCCAATGTGA CCGGGCAGTT GGTGGCCGAC
GACTTCGCCT CAGCTGATTA CTGGGCCCGG CATATCCGGG CGGTGGTGCG GTTTGGCGAC
AGTGTTCGTA GTGCCCACTG CGCCGGTGCC AGTCGTTTCA TCGAAGTCGG GCCCGGTGGC
GGCTTGACGT CGTTGATCGA GGCATCGCTG GCCGACGCGC AGATCGTGTC GGTGCCCACG
CTGCGCAAAG ATCGGCCCGA ACCGGTCAGT GTGATGACGG CGGCGGCCCA GGGCTTCGTC
TCGGGGATGG GCCTGGATTG GGCCTCGGTG TTTTCCGGGT ACCGGCCCAA GCGGGTGGAG
TTGCCGACGT ATGCCTTCCA GCATCAAAAG TTCTGGCTCG CACCAGCCCC ATCGGTCAGC
GACCCCACCG CCGCCGGCCA GATCGGGGCT AGCGATGGTG GTGCTGAACT CTTGGCGTCC
TCCGGGTTTG CCGCCCGGCT GGCCGGTCGG TCGGCCGACG AGCAACTCGC CGCAGCGATC
GAGGTGGTAT GTGAGCATGC CGCAGCGGTG CTGGGGCGCG ACGGCGCTGC CGGACTCGAC
GCTGGCCAGG CGTTTGCCGA TTCGGGATTT AATTCCTTGA GTGCCGTGGA GCTACGTAAC
CGCTTAACAG CCGTCACCGC AGTAACGCTG CCGGCCACCG CGATCTTCGA TCACCCCACC
CCGACCGAAC TAGCCCAGTA TCTGATCACC CAAATAGACG GTCACGGCAG CTCCGCCGCC
GCAGCGGCAA ACCCGGCGGA GCGAATCGAT GCGCTCACCG ATCTTTTTCT ACAAGCTTGC
GATGCGGGTC GGGATGCCGA TGGTTGGAAG ATGGTCGCCC TGGCGTCGAA TACGCGCGAG
CGCATGAGCT CACCGGTTCG GAACAACGTA TCGAAGAACG TCGCACTGCT GGCAGATGGT
ATCTCCGATG TGGTTGTAAT TTGTATCCCA ACTCTAACTG TGCTATCGGA TCAGCGTGAA
TATCGAGATA TTGCGAATGC GATGACAGGC CGCCATTCGG TTTATTCGCT TACGCTTCCC
GGGTTCGATT CGTCTGATGC ACTGCCGCAA AACGCGGATA TGATTGTTGA AACCGTATCT
AACGCAATTA TTGATGTGGT AGGCGGCAGC TGCCGTTTTG TGCTGTCGGG CTATTCATCG
GGTGGGGTGT TGGCCTATGC CCTCTGCTCC CATCTGTCGG TCAAGCACCA GCGGAATCCC
CTCGGAGTCG CACTCATCGA TACATATCTG CCTAGTCAGA TCGCCAATCC TTCAATGAAT
GAAGGGTTCA GCCCCAACGA TACTGGGAAG GGCCTTTCCC GTGAAGTAAT TCGAGTGGCC
AGAATGTTGA ATCGGTTAAC TGCCACCCGA CTCACCGCGG CAGCCACCTA TGCTGCAATC
TTTCAGGCCT GGGAACCAGG TAGATCAATG GCTCCGGTTC TTAACATCGT GGCGAAGGAC
CGAATAGCTA CCGTCGAAAA TTTACGCGAA GAACGAATCA ACCGGTGGCG AACTGCTGCT
GCAGAGGCGG CCTATTCTGT AGCCGAAGTA CCCGGGGATC ATTTCGGAAT GATGAGCACC
TCGAGTGAGG CAATAGCTAC CGAAATACAT GATTGGATTT CTGGGCTCGT TCGAGGGCCT
CATCCGTAG
 
Protein sequence
MTDGSVTADK LQKWFREYLS THIECHPNEV SLDVPIRDLG LKSIDVLAIP GDLGDRFGFC 
IPDLAVWDNP SANDLIDSLL NQRSADSLRE SHGHADRNTQ GRGSINEPVA VIGVGCRFPG
DIDGPERLWD FLTEKKCAIT AYPDRGFTNA GTFAESGGFL KDVAGFDNRF FDIPPDEALR
MDPQQRLLLE VSWEALEHAG IIPESLRLSR TGVFVGVSST DYVRLVSASA QQKSTIWDNT
GGSSSIIANR ISYFLDIQGP SIVIDTACSS SLVAVHLACR SLSTWDCDIA LVGGTNVLIS
PEPWGGFREA GILSQTGCCH AFDKSADGMV RGEGCGVIVL QRLSDARLEG RRILAILTGS
AVNQDGKSNG IMAPNPSAQI GVLENACKSA RVDPLEIGYV EAHGTGTSLG DRIEAHALGM
VFGRKRPGSG PLMIGSIKPN IGHLEGAAGI AGLIKAVLMV ERGSLLPSGG FTEPNPAIPF
TELGLRVVDE LQEWPVVAGR PRRAGVSSFG FGGTNAHVIV EEAGSVGADT VSGRADVGGS
GGGVVAWVIS GKTASALAAQ AGRLGRYVRA RPALDVVDVG YSLVSTRSVF DHRAVVVGQT
RDELLAGLAG VVAGRPEAGV VCGVGKPAGK TAFVFAGQGS QWLGMGSELY AAYPVFAEAL
DAVVDELDRH LRYPLRDVIW GHDQDLLNTT EFAQPALFAV EVALYRLLMS WGVRPGLVLG
HSVGELAAAH VAGALCLPDA AMLVAARGRL MQALPAGGAM FAVQAREDEV APMLGHDVSI
AAVNGPASVV ISGAHDAVSA IADRLRGQGR RVHRLAVSHA FHSALMEPMI AEFTAVAAEL
SVGLPTIPVI SNVTGQLVAD DFASADYWAR HIRAVVRFGD SVRSAHCAGA SRFIEVGPGG
GLTSLIEASL ADAQIVSVPT LRKDRPEPVS VMTAAAQGFV SGMGLDWASV FSGYRPKRVE
LPTYAFQHQK FWLAPAPSVS DPTAAGQIGA SDGGAELLAS SGFAARLAGR SADEQLAAAI
EVVCEHAAAV LGRDGAAGLD AGQAFADSGF NSLSAVELRN RLTAVTAVTL PATAIFDHPT
PTELAQYLIT QIDGHGSSAA AAANPAERID ALTDLFLQAC DAGRDADGWK MVALASNTRE
RMSSPVRNNV SKNVALLADG ISDVVVICIP TLTVLSDQRE YRDIANAMTG RHSVYSLTLP
GFDSSDALPQ NADMIVETVS NAIIDVVGGS CRFVLSGYSS GGVLAYALCS HLSVKHQRNP
LGVALIDTYL PSQIANPSMN EGFSPNDTGK GLSREVIRVA RMLNRLTATR LTAAATYAAI
FQAWEPGRSM APVLNIVAKD RIATVENLRE ERINRWRTAA AEAAYSVAEV PGDHFGMMST
SSEAIATEIH DWISGLVRGP HP