Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10297 |
Symbol | |
ID | 5220960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 356224 |
End bp | 357642 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640605037 |
Product | transmembrane protein |
Protein accession | YP_001286242 |
Protein GI | 148821488 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02958] secretion protein snm4 |
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Plasmid Coverage information |
Num covering plasmid clones | 234 |
Plasmid unclonability p-value | 0.00000883477 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 212 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCA CCGTCATGCA GATCGTCCGC GTCGCCATTC TTGCGGACAG CAGGTTGACC GAGATGGCCC TGCCCGCGGA GTTGCCACTG CGCGAAATCC TGCCCGCGGT ACAACGCTTG GTGGTTCCCT CGGCGCAAAA CGGCGATGGT GGCCAAGCCG ACTCCGGCGC TGCCGTGCAA CTGAGTTTGG CGCCCGTCGG CGGGCAGCCG TTTAGCTTGG ATGCCAGCCT GGACACCGTC GGTGTCGTCG ACGGTGATCT GTTGGTGTTG CAGCCGGTGC CCGCCGGTCC GGCCGCGCCG GGCATCGTCG AAGACATCGC CGACGCCGCG ATGATCTTTT CGACGTCGCG GTTAAAGCCC TGGGGCATAG CGCATATCCA ACGAGGAGCG CTGGCCGCGG TGATTGCCGT GGCTCTGCTG GCTACCGGTT TGACGGTGAC CTATCGGGTT GCCACCGGTG TGCTGGCCGG GCTGCTGGCG GTGGCCGGGA TCGCGGTGGC TAGCGCGCTG GCCGGATTGT TGATCACCAT CCGTTCGCCA CGTTCGGGTA TCGCGCTGTC GATCGCCGCG CTGGTCCCCA TCGGCGCGGC CCTGGCGTTG GCGGTGCCAG GAAAGTTCGG GCCGGCGCAG GTATTGCTGG GTGCAGCTGG GGTAGCCGCA TGGTCGCTGA TCGCGCTGAT GATTCCCAGC GCCGAACGGG AACGCGTCGT CGCCTTCTTC ACCGCAGCGG CGGTGGTCGG GGCGTCGGTG GCGCTGGCGG CCGGTGCGCA ATTGCTGTGG CAGCTGCCGT TGTTGAGCAT CGGCTGCGGG CTGATTGTGG CGGCGCTGTT GGTCACCATC CAGGCGGCTC AGCTTTCCGC ACTGTGGGCG CGGTTCCCGT TGCCGGTGAT CCCGGCGCCG GGGGATCCCA CCCCGTCGGC CCCGCCGTTG CGCCTGCTGG AGGATTTGCC TCGGCGGGTG CGGGTCAGTG ACGCCCATCA AAGCGGCTTC ATCGCCGCGG CCGTGCTGCT CAGCGTGTTG GGGTCGGTGG CCATCGCGGT GCGCCCAGAG GCGCTCAGCG TTGTGGGCTG GTATCTGGTG GCGGCGACTG CGGCCGCGGC CACCCTGCGC GCGCGGGTGT GGGATTCGGC CGCATGCAAG GCGTGGCTGC TGGCTCAGCC CTATCTGGTA GCCGGGGTCC TGTTGGTGTT CTACACCGCG ACCGGACGCT ATGTCGCCGC GTTCGGCGCG GTGCTGGTGC TAGCCGTGCT CATGCTGGCC TGGGTTGTGG TGGCACTGAA CCCGGGCATC GCTTCGCCGG AGAGCTACTC GCTGCCGCTG CGCCGGCTGC TGGGTTTGGT CGCCGCCGGG CTGGATGTTT CGCTGATCCC CGTCATGGCC TACCTGGTCG GATTGTTCGC TTGGGTGCTC AACAGATGA
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Protein sequence | MSGTVMQIVR VAILADSRLT EMALPAELPL REILPAVQRL VVPSAQNGDG GQADSGAAVQ LSLAPVGGQP FSLDASLDTV GVVDGDLLVL QPVPAGPAAP GIVEDIADAA MIFSTSRLKP WGIAHIQRGA LAAVIAVALL ATGLTVTYRV ATGVLAGLLA VAGIAVASAL AGLLITIRSP RSGIALSIAA LVPIGAALAL AVPGKFGPAQ VLLGAAGVAA WSLIALMIPS AERERVVAFF TAAAVVGASV ALAAGAQLLW QLPLLSIGCG LIVAALLVTI QAAQLSALWA RFPLPVIPAP GDPTPSAPPL RLLEDLPRRV RVSDAHQSGF IAAAVLLSVL GSVAIAVRPE ALSVVGWYLV AATAAAATLR ARVWDSAACK AWLLAQPYLV AGVLLVFYTA TGRYVAAFGA VLVLAVLMLA WVVVALNPGI ASPESYSLPL RRLLGLVAAG LDVSLIPVMA YLVGLFAWVL NR
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