| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10283 |
|---|
| Symbol | |
|---|
| ID | 5220946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 333754 |
|---|
| End bp | 335433 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640605023 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_001286228 |
|---|
| Protein GI | 148821474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 2.49293e-71 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 196 |
|---|
| Fosmid unclonability p-value | 0.350076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTCG GCTCCGGCGG CGCCGGCGGC GCCGGCGGGT TCGGCCGCAC CACCGGCGGG
ATAGGAGGCA CCGGCGGCAA CGCCGGCCTG CTCAACGGCT CCGGCGGCGC CGGCGGCGCC
GGCGGCGCTG CTATCACCGG TCCAGGCGGC ACCGGCGGGG CCGGTGGCAT ACCCGGTTTG
ATCGGCAACG GCGGCAACGG CGGTGACGGC GGCGCCAGCG TGACCGGCAC CGGCGGCAAC
GGCGGAGCGG GCGGTAACGG CGTGCAGATC GGCAACGGCG GCAACGGCGG CAGCGGCGGG
ACCGGCGCAG CCGCGGGCAA GGCCGGCCTC GGCGGCCTCG GCGGGCAGCT AATAGGACTA
GACGGATCCA ATGCTCCAGT CAGCACCTCA GTCCATACCC TGCAGCAGGC AGCGCTCAAT
GTGGTGAATG AGCCCTTCCA GACATTGACT GGGCGTCCGC TGATCGGCAA CGGCGCCAAC
GGGACCCCGG GGACCGGGGC TGCCGGCGGG GCCGGCGGGT GGTTGTTCGG CAACGGCGGT
AACGGCGGGC ACGGTGCGAC CAACACCGCC GCCACGGCTA CGGGCGGGGC CGGCGGGGCC
GGCGGGATCT TGTTCGGTAC CGGTGGCAAT GGCGGGACCG GCGGGATAGC CACCGGTGCT
GGAGGGATCG GCGGGGCCGG CGGCGCCGGT GGGGTCTCCT TGCTGATCGG CTCCGGCGGC
ACCGGCGGCA ACGGTGGGAA CTCCATAGGC GTCGCTGGCA TCGGCGGGGC CGGCGGGCGC
GGCGGCGACG CCGGTTTGCT CTTCGGCGCG GCCGGCACCG GCGGCCACGG CGCCGCTGGC
GGTGTCCCGG CCGGCGTCGG CGGCGCCGGC GGCAACGGCG GACTGTTCGC CAACGGCGGA
GCCGGAGGGG CCGGCGGGTT CAACGCAGCC GGCGGGAACG GCGGGAACGG CGGACTGTTC
GGAACTGGCG GCACCGGCGG GGCCGGCACG AACTTCGGGG CCGGTGGGAA CGGCGGGAAC
GGCGGACTGT TCGGAGCCGG CGGCACCGGC GGCGCCGCCG GCTCGGGAGG GTCCGGGATC
ACCACCGGCG GCGGCGGGCA CGGCGGCAAC GCCGGCCTAC TCTCCCTCGG CGCCTCCGGT
GGCGCCGGCG GCAGCGGTGG CGCCAGCTCC CTTGCCGGCG GGGCCGGCGG AACCGGCGGG
AACGGCGCCT TACTCTTCGG CTTCGGCGGC GCCGGCGGCG CCGGCGGGCA CGGCGGGGCA
GCACTTACCA GCATCCAGCA AGGCGGCGCC GGCGGCGCCG GCGGGAACGG CGGCTTGCTC
TTCGGCTCCG CCGGCGCCGG CGGCGCCGGC GGCAGCGGTG CCAACGCTCT AGGCGCCGGT
ACCGGCGGCA CCGGCGGTGA CGGTGGCCAC GCCGGGGTGT TCGGCAACGG CGGTGACGGG
GGTTGCCGGC GGGTTTGGCG CCGGTACCGG CGGCAGCGGT GGTGTCGGCG GCAACGCCGT
GCTGATCGGC AACGGCGGCA ACGGCGGCAA CGCCGGCAAA GCCGGGGCCA CGCCCGGTGC
CGGCGGCACC GGCGGGCTGC TGCTCGGCGA GAACGGACTC AACGGCTTGC CATAGCAGGC
AGACCTGCGA CCACACGCGG CGTTGAGGGC ATCAGTTGCT CACCGCAGAT GATGCCGTAG
|
|---|
| Protein sequence | MFFGSGGAGG AGGFGRTTGG IGGTGGNAGL LNGSGGAGGA GGAAITGPGG TGGAGGIPGL
IGNGGNGGDG GASVTGTGGN GGAGGNGVQI GNGGNGGSGG TGAAAGKAGL GGLGGQLIGL
DGSNAPVSTS VHTLQQAALN VVNEPFQTLT GRPLIGNGAN GTPGTGAAGG AGGWLFGNGG
NGGHGATNTA ATATGGAGGA GGILFGTGGN GGTGGIATGA GGIGGAGGAG GVSLLIGSGG
TGGNGGNSIG VAGIGGAGGR GGDAGLLFGA AGTGGHGAAG GVPAGVGGAG GNGGLFANGG
AGGAGGFNAA GGNGGNGGLF GTGGTGGAGT NFGAGGNGGN GGLFGAGGTG GAAGSGGSGI
TTGGGGHGGN AGLLSLGASG GAGGSGGASS LAGGAGGTGG NGALLFGFGG AGGAGGHGGA
ALTSIQQGGA GGAGGNGGLL FGSAGAGGAG GSGANALGAG TGGTGGDGGH AGVFGNGGDG
GCRRVWRRYR RQRWCRRQRR ADRQRRQRRQ RRQSRGHARC RRHRRAAARR ERTQRLAIAG
RPATTRGVEG ISCSPQMMP
|
|---|
| |