Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10236 |
Symbol | gabD1 |
ID | 5220899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 279923 |
End bp | 281458 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640604976 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_001286181 |
Protein GI | 148821427 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 349 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 220 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATCGG TGACATGTTC CGCCACGCTG GTCCTGCCCG TGATAGAGCC CACCCCAGCC GATAGGAGGC CCCGACACCT CCTGCTCGGG AGCGCTGGCC ACGTTAGTGG CAGGCTGGAC ACCGGACGAT TTGTGCAAAC CCACCCAGCA AAGGATGTCA GCGTGCCCAT CGCCACCATC AACCCGGCTA CCGGCGAAAC AGTCAAGACA TTCACTGCGG CGACCGATGA CGAAGTCGAC GCGGCAATAG CCCGGGCCCA CCGGCGGTTC GCCGACTACC GCCAGACCAG CTTCGCCCAG CGCGCCCGGT GGGCCAATGC CACCGCCGAC TTGCTGGAAG CCGAGGCCGA CCAGGCCGCC GCGATGATGA CGCTCGAGAT GGGCAAGACG CTGGCCGCGG CCAAAGCCGA GGCACTGAAG TGCGCCAAGG GTTTTCGCTA CTACGCCGAA AACGCCGAGG CGTTGCTGGC CGACGAACCC GCCGATGCGG CCAAGGTCGG GGCGTCGGCG GCCTACGGCC GATACCAGCC GCTCGGGGTG ATCCTGGCGG TGATGCCATG GAACTTCCCC CTGTGGCAAG CGGTTCGGTT CGCCGCACCG GCACTGATGG CCGGAAACGT CGGCCTGCTC AAGCACGCGT CGAACGTGCC GCAATGCGCG CTGTACCTGG CCGACGTCAT CGCCCGAGGC GGCTTCCCGG ACGGCTGCTT CCAGACGTTG CTTGTTAGCT CGGGAGCCGT CGAAGCCATC CTGCGTGATC CCCGGGTCGC GGCGGCCACG CTGACCGGAA GCGAGCCGGC CGGCCAATCG GTGGGCGCTA TCGCCGGTAA CGAGATCAAG CCGACCGTGC TCGAGCTCGG CGGCAGCGAC CCGTTCATCG TTATGCCGTC GGCCGATCTG GACGCCGCGG TCAGCACCGC CGTCACCGGC CGGGTGCAGA ACAACGGCCA ATCCTGCATC GCCGCCAAGC GGTTCATCGT CCACGCCGAC ATTTACGACG ATTTCGTCGA CAAGTTCGTC GCGCGGATGG CGGCGTTACG GGTCGGCGAC CCGACCGACC CGGACACCGA CGTGGGCCCG CTGGCCACCG AGCAGGGCCG CAACGAGGTT GCCAAGCAAG TCGAGGATGC TGCCGCGGCG GGCGCGGTGA TCCGGTGCGG CGGAAAGCGT CTCGACCGGC CGGGCTGGTT CTACCCGCCG ACCGTGATCA CCGACATCTC CAAGGACATG GCTCTCTACA CCGAGGAGGT CTTCGGTCCG GTCGCCTCGG TGTTCCGCGC GGCGAACATC GACGAGGCCG TCGAGATCGC CAACGCCACC ACCTTCGGGC TGGGATCCAA CGCCTGGACC CGCGACGAGA CCGAGCAACG ACGCTTCATC GACGACATCG TGGCGGGCCA GGTTTTTATC AACGGCATGA CGGTGTCCTA TCCCGAATTG CCGTTCGGCG GGGTCAAGCG CTCGGGCTAT GGCCGGGAAC TGTCCGCACA CGGGATACGC GAGTTCTGCA ACATCAAGAC CGTCTGGATC GCCTAG
|
Protein sequence | MRSVTCSATL VLPVIEPTPA DRRPRHLLLG SAGHVSGRLD TGRFVQTHPA KDVSVPIATI NPATGETVKT FTAATDDEVD AAIARAHRRF ADYRQTSFAQ RARWANATAD LLEAEADQAA AMMTLEMGKT LAAAKAEALK CAKGFRYYAE NAEALLADEP ADAAKVGASA AYGRYQPLGV ILAVMPWNFP LWQAVRFAAP ALMAGNVGLL KHASNVPQCA LYLADVIARG GFPDGCFQTL LVSSGAVEAI LRDPRVAAAT LTGSEPAGQS VGAIAGNEIK PTVLELGGSD PFIVMPSADL DAAVSTAVTG RVQNNGQSCI AAKRFIVHAD IYDDFVDKFV ARMAALRVGD PTDPDTDVGP LATEQGRNEV AKQVEDAAAA GAVIRCGGKR LDRPGWFYPP TVITDISKDM ALYTEEVFGP VASVFRAANI DEAVEIANAT TFGLGSNAWT RDETEQRRFI DDIVAGQVFI NGMTVSYPEL PFGGVKRSGY GRELSAHGIR EFCNIKTVWI A
|
| |