| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10175 |
|---|
| Symbol | |
|---|
| ID | 5220838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 205547 |
|---|
| End bp | 207094 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640604915 |
|---|
| Product | MCE-family protein mce1F |
|---|
| Protein accession | YP_001286120 |
|---|
| Protein GI | 148821366 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 423 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 254 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACTC GCTTCATCCG ACGCCAGTTG ATCCTTTTTG CGATCGTCTC CGTAGTCGCA
ATCGTCGTAT TGGGCTGGTA CTACCTGCGA ATTCCGAGTC TGGTGGGTAT CGGGCAGTAC
ACCTTGAAGG CCGACTTGCC CGCATCGGGT GGCCTGTATC CGACGGCCAA TGTGACCTAC
CGCGGTATCA CCATTGGCAA GGTTACTGCC GTCGAGCCCA CCGACCAGGG CGCACGAGTG
ACGATGAGCA TCGCCAGCAA CTACAAAATC CCCGTCGATG CCTCGGCGAA CGTGCATTCG
GTGTCAGCGG TGGGCGAGCA GTACATCGAC CTGGTGTCCA CCGGTGCTCC GGGTAAATAC
TTCTCCTCCG GACAGACCAT CACCAAGGGC ACCGTTCCCA GTGAGATCGG GCCGGCGCTG
GACAATTCCA ATCGCGGGTT GGCCGCATTG CCCACGGAGA AGATCGGCTT GCTGCTCGAC
GAGACCGCGC AAGCGGTGGG TGGGCTGGGA CCCGCGTTGC AACGGTTGGT CGATTCCACT
CAAGCGATCG TCGGTGACTT CAAAACCAAC ATTGGCGACG TCAACGACAT CATCGAGAAC
TCCGGGCCGA TTTTGGACAG CCAGGTCAAC ACGGGTGATC AGATCGAGCG CTGGGCGCGC
AAATTGAACA ATCTGGCCGC ACAGACCGCG ACCAGGGATC AGAACGTGCG AAGCATCCTG
TCCCAGGCGG CCCCCACCGC CGATGAGGTT AACGCGGTAT TCAGCGGTGT TCGCGATTCG
CTGCCACAGA CCCTGGCCAA TCTTGAGGTT GTGTTCGATA TGCTCAAGCG CTACCACGCC
GGCGTGGAGC AATTGTTGGT GTTCCTCCCA CAGGGTGCCG CGATCGCACA GACCGTACTC
ACGCCAACTC CGGGTGCTGC CCAGCTGCCG CTCGCGCCGG CGATCAACTA TCCGCCGCCG
TGCTTGACGG GTTTTCTTCC TGCATCGGAG TGGCGGTCTC CGGCCGATAC CAGTCCCAGG
CCGTTGCCGT CGGGAACCTA TTGCAAGATT CCCCAGGATG CCCAGCTGCA AGTCCGGGGG
GCGCGCAACA TTCCCTGTGT CGATGTCCCG GGCAAACGAG CGGCGACGCC GAAGGAGTGC
CGCAGTAAGG ACCCGTACGT TCCGCTGGGT ACCAACCCGT GGTTTGGTGA TCCGAACCAG
ATTCTCACCT GCCCGGCACC TGGAGCGCGC TGCGATCAGC CGGTGAAGCC CGGGTTGGTG
ATTCCGGCGC CCTCGATCAA CACCGGTTTG AATCCGGCGC CCGCCGATCA GGTGCAAGGA
ACGCCCCCGC CGGTCAGTGA CCCGTTGCAA AGACCGGGTT CGGGTACTGT GCAGTGCAAC
GGGCAGCAGC CTAACCCGTG CGTCTACACT CCAACATCGG GCCCGTCGGC GGTCTATAGC
CCGGCCAGCG GTGAACTGGT GGGGCCGGAT GGTGTCAAGT ACGCCGTCGC AAACTCGAGC
ACAACAGGAG ACGACGGATG GAAGGAGATG CTGGCGCCGG CCAGCTGA
|
|---|
| Protein sequence | MLTRFIRRQL ILFAIVSVVA IVVLGWYYLR IPSLVGIGQY TLKADLPASG GLYPTANVTY
RGITIGKVTA VEPTDQGARV TMSIASNYKI PVDASANVHS VSAVGEQYID LVSTGAPGKY
FSSGQTITKG TVPSEIGPAL DNSNRGLAAL PTEKIGLLLD ETAQAVGGLG PALQRLVDST
QAIVGDFKTN IGDVNDIIEN SGPILDSQVN TGDQIERWAR KLNNLAAQTA TRDQNVRSIL
SQAAPTADEV NAVFSGVRDS LPQTLANLEV VFDMLKRYHA GVEQLLVFLP QGAAIAQTVL
TPTPGAAQLP LAPAINYPPP CLTGFLPASE WRSPADTSPR PLPSGTYCKI PQDAQLQVRG
ARNIPCVDVP GKRAATPKEC RSKDPYVPLG TNPWFGDPNQ ILTCPAPGAR CDQPVKPGLV
IPAPSINTGL NPAPADQVQG TPPPVSDPLQ RPGSGTVQCN GQQPNPCVYT PTSGPSAVYS
PASGELVGPD GVKYAVANSS TTGDDGWKEM LAPAS
|
|---|
| |