Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10173 |
Symbol | |
ID | 5220836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 202792 |
End bp | 204384 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640604913 |
Product | MCE-family protein mce1D |
Protein accession | YP_001286118 |
Protein GI | 148821364 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 350 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 244 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCACCA TCTTTGATAT CCGCAACCTG CGGTTGCCGC AGCTGTCGCG GGCCTCGGTT GTCATCGGAT CGTTGGTGGT GGTGCTGGCG CTGGCCGCCG GAATTGTTGG TGTGCGGCTC TATCAAAAAC TGACGAACAA CACGGTGGTC GCCTACTTCA CCCAAGCCAA TGCGCTGTAT GTCGGAGACA AGGTCCAGAT TATGGGCCTC CCGGTCGGTT CGATCGACAA GATCGAACCA GCCGGCGACA AAATGAAGGT GACTTTCCAC TACCAGAACA AGTACAAGGT GCCTGCCAAT GCCTCCGCGG TGATCCTCAA CCCCACCTTG GTGGCGTCGC GGAACATTCA GTTGGAGCCA CCCTACAGAG GTGGTCCAGT GCTGGCCGAT AATGCGGTGA TCCCGGTCGA GCGCACCCAG GTACCGACGG AGTGGGACGA GCTGCGGGAC AGCGTTTCGC ATATTATCGA CGAGCTCGGC CCGACACCTG AGCAGCCCAA GGGGCCGTTC GGCGAAGTCA TCGAGGCATT CGCCGACGGG CTGGCCGGCA AGGGTAAGCA AATCAACACC ACGCTGAACA GCCTGTCGCA GGCGTTGAAC GCCTTGAATG AGGGCCGCGG CGACTTCTTC GCGGTGGTAC GCAGCCTGGC GCTATTCGTC AACGCGCTAC ATCAGGACGA CCAACAGTTC GTCGCGTTGA ACAAGAACCT TGCGGAGTTC ACCGACAGGT TGACCCACTC CGATGCGGAC CTGTCGAACG CCATCCAGCA ATTCGACAGC TTGCTCGCCG TCGTGCGCCC GTTCTTCGCC AAGAACCGCG AGGTGCTGAC GCATGACGTC AATAATCTCG CGACCGTGAC CACCACGTTG CTGCAGCCCG ATCCGTTGGA TGGGTTGGAG ACCGTCCTGC ACATCTTCCC GACGCTGGCG GCGAACATTA ACCAGCTTTA CCATCCGACA CACGGTGGCG TGGTGTCGCT TTCCGCGTTC ACGAATTTCG CCAACCCGAT GGAGTTCATC TGCAGCTCGA TTCAGGCGGG TAGCCGGCTC GGTTATCAAG AGTCGGCCGA ACTCTGTGCG CAGTATCTGG CGCCAGTCCT CGATGCGATC AAGTTCAACT ACTTTCCGTT CGGCCTGAAC GTGGCCAGCA CCGCCTCGAC ACTGCCTAAA GAGATCGCGT ACTCCGAGCC CCGCTTGCAG CCGCCCAACG GGTACAAGGA CACCACGGTG CCCGGCATCT GGGTGCCGGA TACGCCGTTG TCACACCGCA ACACGCAGCC CGGTTGGGTG GTGGCACCCG GGATGCAAGG GGTTCAGGTG GGACCGATCA CGCAGGGTTT GCTGACGCCG GAGTCCCTGG CCGAACTCAT GGGTGGTCCC GATATCGCCC CTCCGTCGTC AGGGCTGCAA ACCCCGCCCG GACCCCCGAA TGCGTACGAC GAGTACCCCG TGCTGCCGCC GATCGGTTTA CAGGCCCCAC AGGTGCCGAT ACCACCGCCG CCTCCTGGGC CCGACGTAAT CCCGGGTCCG GTGCCACCGA CGCCGGCACC GGTGGGGGCG CCGTTGCCCG CTGAGGCAGG AGGGGGTCAA TGA
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Protein sequence | MSTIFDIRNL RLPQLSRASV VIGSLVVVLA LAAGIVGVRL YQKLTNNTVV AYFTQANALY VGDKVQIMGL PVGSIDKIEP AGDKMKVTFH YQNKYKVPAN ASAVILNPTL VASRNIQLEP PYRGGPVLAD NAVIPVERTQ VPTEWDELRD SVSHIIDELG PTPEQPKGPF GEVIEAFADG LAGKGKQINT TLNSLSQALN ALNEGRGDFF AVVRSLALFV NALHQDDQQF VALNKNLAEF TDRLTHSDAD LSNAIQQFDS LLAVVRPFFA KNREVLTHDV NNLATVTTTL LQPDPLDGLE TVLHIFPTLA ANINQLYHPT HGGVVSLSAF TNFANPMEFI CSSIQAGSRL GYQESAELCA QYLAPVLDAI KFNYFPFGLN VASTASTLPK EIAYSEPRLQ PPNGYKDTTV PGIWVPDTPL SHRNTQPGWV VAPGMQGVQV GPITQGLLTP ESLAELMGGP DIAPPSSGLQ TPPGPPNAYD EYPVLPPIGL QAPQVPIPPP PPGPDVIPGP VPPTPAPVGA PLPAEAGGGQ
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