Gene TBFG_10171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10171 
Symbol 
ID5220834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp200211 
End bp201251 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content60% 
IMG OID640604911 
ProductMCE-family protein mce1B 
Protein accessionYP_001286116 
Protein GI148821362 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones379 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones245 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CTGGAACCGT CGTCAAACTC GGCATCGTCT CGGTGGTGCT GCTGTTCTTC 
ACGGTGATGA TCATCGTGAT TTTCGGTCAG ATGCGCTTCG ACCGGACTAA TGGCTATACC
GCGGAGTTCA GCAATGTCAG CGGGCTGCGC CAAGGCCAGT TTGTCCGTGC TTCGGGGGTA
GAGATCGGCA AGGTCAAAGC ACTACACCTG GTCGACGGTG GCCGTCGGGT TCGGGTGGAG
TTCAATATCG ATCGTTCGGT GCCGTTGTAT CAGTCCACGA CCGCCCAGAT CCGCTATTCC
GACCTGATCG GTAACCGGTA CGTGGAGCTC AAACGGGGTG AGGGCAAGGG GGCCAACGAT
CTGCTGCCGC CAGGTGGACT CATCCCATTG TCCCGCACGT CACCGGCCTT GGATCTGGAC
GCGTTGATCG GTGGTTTCAA GCCGGTGTTT CGGGCGTTGG ATCCCGCGAA GGTGAACAAC
ATCGCCAACG CGCTCATCAC CGTCTTCCAG GGGCAAGGTG GCACCATAAA CGACATCCTC
GACCAGACCG CGCAACTGAC CAGCCAGATC GCGGAGCGCG ATCAGGCGAT CGGTGAGGTT
GTCAAGAACC TGAACATCGT GCTGGACACC ACGGTCAAGC ATCGAAAAGA GTTCGACGAG
ACGGTCAATA ACTTGGAGAA TCTGATCACT GGGCTGAGGA ACCACTCCGA CCAGTTGGCC
GGCGGCCTCG CGCACATCAG CAACGGCGCC GGCACGGTGG CCGACCTGCT TGCCGAGAAT
CGCACGTTGG TGCGCAAGGC CGTCAGCTAC CTGGACGCTA TTCAGCAACC GGTCATCGAC
CAGCGCGTCG AGTTGGACGA CCTGCTCCAC AAGACGCCGA CCGCGTTGAC GGCGCTCGGA
CGCGCCAACG GAACCTACGG CGATTTCCAG AACTTCTACC TCTGCGACCT CCAGATCAAG
TGGAACGGAT TCCAAGCCGG AGGGCCGGTC CGCACGGTGA AGCTCTTTAG CCAGCCGACG
GGTAGGTGCA CGCCGCAATG A
 
Protein sequence
MKITGTVVKL GIVSVVLLFF TVMIIVIFGQ MRFDRTNGYT AEFSNVSGLR QGQFVRASGV 
EIGKVKALHL VDGGRRVRVE FNIDRSVPLY QSTTAQIRYS DLIGNRYVEL KRGEGKGAND
LLPPGGLIPL SRTSPALDLD ALIGGFKPVF RALDPAKVNN IANALITVFQ GQGGTINDIL
DQTAQLTSQI AERDQAIGEV VKNLNIVLDT TVKHRKEFDE TVNNLENLIT GLRNHSDQLA
GGLAHISNGA GTVADLLAEN RTLVRKAVSY LDAIQQPVID QRVELDDLLH KTPTALTALG
RANGTYGDFQ NFYLCDLQIK WNGFQAGGPV RTVKLFSQPT GRCTPQ