| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10170 |
|---|
| Symbol | |
|---|
| ID | 5220833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 198850 |
|---|
| End bp | 200214 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640604910 |
|---|
| Product | MCE-family protein mce1A |
|---|
| Protein accession | YP_001286115 |
|---|
| Protein GI | 148821361 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 368 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 246 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC CGGGGAAGCT GAACAAGGCG CGAGTGCCGC CCTACAAGAC GGCGGGTTTG
GGTCTAGTGC TGGTCTTCGC GCTCGTAGTT GCCTTGGTAT ACCTGCAGTT TCGCGGGGAG
TTCACGCCCA AGACGCAGTT GACGATGCTG TCCGCTCGTG CGGGTTTGGT GATGGATCCC
GGGTCGAAGG TCACCTATAA CGGGGTGGAG ATCGGGCGGG TAGACACCAT CTCGGAGGTC
ACACGTGACG GCGAGTCGGC GGCCAAGTTC ATCTTGGATG TGGATCCGCG TTACATCCAC
CTGATTCCGG CAAATGTGAA CGCCGACATC AAGGCGACCA CGGTGTTCGG CGGTAAGTAT
GTGTCGTTGA CCACGCCGAA AAACCCGACA AAGAGGCGGA TAACGCCAAA AGACGTCATC
GACGTACGGT CGGTGACCAC CGAGATCAAC ACGTTGTTCC AGACGCTCAC CTCGATCGCC
GAGAAGGTGG ATCCGGTCAA GCTGAACCTG ACCCTGAGCG CGGCCGCGGA GGCGTTGACC
GGGCTGGGCG ATAAGTTCGG CGAGTCGATC GTCAACGCCA ACACCGTTCT GGATGACCTC
AATTCGCGGA TGCCGCAGTC GCGCCACGAC ATTCAGCAAT TGGCGGCTCT GGGCGACGTC
TACGCCGACG CGGCGCCGGA CCTGTTCGAC TTTCTCGACA GTTCGGTGAC CACCGCCCGC
ACCATCAATG CCCAGCAAGC GGAACTGGAT TCGGCGCTGT TGGCGGCGGC CGGGTTCGGC
AACACCACAG CCGATGTCTT CGACCGCGGC GGGCCGTATC TGCAGCGGGG GGTCGCCGAC
CTGGTCCCCA CCGCCACCCT GCTCGACACT TATAGCCCGG AACTGTTCTG CACGATCCGC
AACTTCTACG ATGCCGATCC GCTCGCTAAA GCGGCGTCCG GTGGCGGTAA CGGCTACTCG
CTGAGGACGA ACTCAGAGAT CCTATCCGGG ATAGGTATCT CCTTGTTGTC TCCCCTGGCG
TTAGCCACCA ATGGGGCGGC AATCGGAATC GGACTGGTAG CCGGATTGAT AGCGCCGCCC
CTCGCGGTGG CCGCAAATCT AGCGGGAGCC CTACCCGGAA TCGTTGGCGG CGCGCCCAAT
CCCTATACCT ATCCGGAGAA TCTGCCGCGG GTGAACGCTC GCGGTGGCCC GGGGGGCGCC
CCCGGTTGCT GGCAGCCGAT CACCCGGGAT CTGTGGCCAG CGCCGTATCT GGTGATGGAC
ACCGGTGCCA GCCTCGCCCC GTACAACCAC ATGGAGGTTG GCTCGCCTTA TGCAGTCGAG
TACGTCTGGG GCCGTCAGGT AGGGGATAAC ACGATCAACC CATGA
|
|---|
| Protein sequence | MTTPGKLNKA RVPPYKTAGL GLVLVFALVV ALVYLQFRGE FTPKTQLTML SARAGLVMDP
GSKVTYNGVE IGRVDTISEV TRDGESAAKF ILDVDPRYIH LIPANVNADI KATTVFGGKY
VSLTTPKNPT KRRITPKDVI DVRSVTTEIN TLFQTLTSIA EKVDPVKLNL TLSAAAEALT
GLGDKFGESI VNANTVLDDL NSRMPQSRHD IQQLAALGDV YADAAPDLFD FLDSSVTTAR
TINAQQAELD SALLAAAGFG NTTADVFDRG GPYLQRGVAD LVPTATLLDT YSPELFCTIR
NFYDADPLAK AASGGGNGYS LRTNSEILSG IGISLLSPLA LATNGAAIGI GLVAGLIAPP
LAVAANLAGA LPGIVGGAPN PYTYPENLPR VNARGGPGGA PGCWQPITRD LWPAPYLVMD
TGASLAPYNH MEVGSPYAVE YVWGRQVGDN TINP
|
|---|
| |