Gene TBFG_10111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_10111 
Symbol 
ID5220774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp133051 
End bp133905 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID640604851 
Productintegral membrane protein 
Protein accessionYP_001286056 
Protein GI148821302 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones295 
Plasmid unclonability p-value0.000358908 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones224 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG CCAGCTCATC GGAGTCGCCC ACCTGCTATC GCCATCCCGG GCGCCGGACC 
TACGTCCGCT GCACCCGATG TGATCGGTAC ATCTGTGGCG AATGTATGCG CGTGGGTCCC
GTCGGCCACC AGTGCGCGGA GTGTGTGCGC GAAGGCGCCC GGGCGGTGCG GCAGCCTCGT
ACCCCATTCG GCGGGCGGCA GCGGTCGGCA ACTCCGGTGG TTACATACAC GCTGATCTCG
CTGAATGCGC TGGTGTTCGT CATGCAAGTG ACCGTGATGG GTCTGGAACG GCAGCTCGCT
TTGTGGCCAC CCGCGGTCGC CAGCGGTCAG ACCTACCGGT TGGTGACCTC GGCGTTCCTG
CACTACGGGG CGATGCACCT GCTGTTGAAC ATGTGGGCGC TGTATGTGGT GGGTCCGCCG
TTGGAGATGT GGCTGGGCCG GTTGCGGTTC GGCGCGCTGT ATGCGGTGAG CGCGCTGGGT
GGCTCGGTGT TGGTCTATCT GATCGCACCG CTTAATACGG CGACGGCGGG GGCATCGGGG
GCGGTGTTCG GTCTTTTCGG TGCCACGTTC ATGGTGGCCA GGCGGCTCCA CCTTGATGTT
CGTTGGGTCG TCGCGCTCAT CGTGATCAAC TTGGCTTTCA CGTTCCTCGC GCCGGCGATC
AGCTGGCAGG GGCACGTCGG CGGGCTGGTA ACGGGTGCGC TGGTGGCAGC GACCTACGTC
TACGCGCCCA GGGAACGTCG GAACTTGATC CAGGCCACAG TGACGATCAC CGTTTTGGTT
GCGTTCGTCG TGCTGATCGG CTGGCGCACA GTCGATTTGC TCGCACTGTT CGGTGGGCGC
CTCAACCTGA GCTGA
 
Protein sequence
MSGASSSESP TCYRHPGRRT YVRCTRCDRY ICGECMRVGP VGHQCAECVR EGARAVRQPR 
TPFGGRQRSA TPVVTYTLIS LNALVFVMQV TVMGLERQLA LWPPAVASGQ TYRLVTSAFL
HYGAMHLLLN MWALYVVGPP LEMWLGRLRF GALYAVSALG GSVLVYLIAP LNTATAGASG
AVFGLFGATF MVARRLHLDV RWVVALIVIN LAFTFLAPAI SWQGHVGGLV TGALVAATYV
YAPRERRNLI QATVTITVLV AFVVLIGWRT VDLLALFGGR LNLS