| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10087 |
|---|
| Symbol | |
|---|
| ID | 5220750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 94084 |
|---|
| End bp | 95550 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640604827 |
|---|
| Product | hydrogenase hycQ |
|---|
| Protein accession | YP_001286032 |
|---|
| Protein GI | 148821278 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 219 |
|---|
| Plasmid unclonability p-value | 0.000000498381 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 190 |
|---|
| Fosmid unclonability p-value | 0.186315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTT TGCTGCTTGC CGCGATCCTC GCACCGCTCG CCGCGTCAAT CGCCTCCTTG
ATCACCGGGT GGCGACGCAC GACGGCGACG CTCACCGCGC TGTCCGCCAC GACGGTGCTG
GCCTGCGCTG TGGCGATGGG GTTTTGGATG GGGTCGGGGG CGCAGTTCGG GCTGGGCGGT
CTGCTGCGCG CCGATGCGCT GACGGTGGTC ATGCTCGTCG TCATCGGGAT CGTCGGCACA
CTGGCCACCG CGGCGAGCAT CGGCTACATC GACACCGAGC TGGCACACGG GCATATCGAC
GGACGTAGCG CTCGGCTGTA TGGGGTGCTG ACCCCGGCGT TTCTTTGCGC GATGGTTCTG
GCGGTGTGCG CCAACAACAT CGGCGTCATT TGGGTAGCGA TCGAGGCCAC CACGGTGATC
ACCGCGTTTC TGGTGGGGCA TCGCCGCACC CGCACCGCGC TGGAAGCGAC CTGGAAATAC
GTGGTGATCT GTTCGGTCGG GATCGCCGTC GCCTTCTTGG GTACCGTGCT GCTGTATTTC
GCCGCGCGGG ATTCCGGTGC CGCTGCTGCC GGCGCGCTGA ACCTCGATAT CCTGGCCGAA
CACGCCGCCG GCCTAGACCC CGGGGTCGCT CGACTGGCCG GCGGGTTGCT GCTCATCGGT
TATGGCGCCA AGGCGGGCCT CTTCCCGTTT CACACCTGGC TGGCGGACGC GCACAGCCAA
GCCCCCGCAC CGGTGTCCGC ACTGATGAGC GGCGTGCTGC TGGCGGTGGC GTTCTCGGTG
CTGATCCGAT TGCGGCCGAT CCTCGACGCG GTCAGCGGGC CCGCCTACCT GCGCAACGGG
CTGCTCGTGG TCGGGTTGGC GACGCTGCTG GTGGCGGTGC TGATGCTGAC CGTGACCGGC
GACGTCAAGC GGATGCTGGC CTACTCGTCG ATGGAGCACA TGGGCCTGAT CGCGATCGCC
GCGGCCGCCG GCACGACATT GGCGATCGCC GCGCTGCTGC TGCACGTGCT CGCCCACGGG
ATCGGCAAGA CCGTGCTGTT TCTGGCGGGC GGTCAGCTGC AGGCCGCACA CGACTCCACC
GCCATCGCCG ATATCACCGG CGTGATGCGA CGGTCGCGGC TGATCGGCGT GTCGTTTGCC
GTCGGCCTGA TCGTCCTGCT TGGCTTGCCG CCGTTCGCGA TGTTCGCCAG CGAGCTGGCG
ATCGCGCGCT CATTGGCCAA CGAGCGGCTG GCCTGGGTGC TGGGTGCGGC GCTGCTGCTG
ATCGCCATCG GTTTCACGGC TCTGGCACGC AATTCCGGAC GCATGCTGCT CGGCACCCCG
GCGGCGGGCG CGCCGGCGAT CACCGTGCCG GCCACCGCGG CGGCGGCGTT GATGGTGGGC
ATCGTCGTCT CGGCGGCCCT CGGCATCACC GCGGGCCCAC TCGCCGACCT GCTTGGCATC
GCCGCCAGCA ACGTGGGTCT ACCGTGA
|
|---|
| Protein sequence | MTGLLLAAIL APLAASIASL ITGWRRTTAT LTALSATTVL ACAVAMGFWM GSGAQFGLGG
LLRADALTVV MLVVIGIVGT LATAASIGYI DTELAHGHID GRSARLYGVL TPAFLCAMVL
AVCANNIGVI WVAIEATTVI TAFLVGHRRT RTALEATWKY VVICSVGIAV AFLGTVLLYF
AARDSGAAAA GALNLDILAE HAAGLDPGVA RLAGGLLLIG YGAKAGLFPF HTWLADAHSQ
APAPVSALMS GVLLAVAFSV LIRLRPILDA VSGPAYLRNG LLVVGLATLL VAVLMLTVTG
DVKRMLAYSS MEHMGLIAIA AAAGTTLAIA ALLLHVLAHG IGKTVLFLAG GQLQAAHDST
AIADITGVMR RSRLIGVSFA VGLIVLLGLP PFAMFASELA IARSLANERL AWVLGAALLL
IAIGFTALAR NSGRMLLGTP AAGAPAITVP ATAAAALMVG IVVSAALGIT AGPLADLLGI
AASNVGLP
|
|---|
| |