Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10071 |
Symbol | |
ID | 5220734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 79628 |
End bp | 80326 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640604811 |
Product | maturase |
Protein accession | YP_001286016 |
Protein GI | 148821262 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 313 |
Plasmid unclonability p-value | 0.000865432 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 187 |
Fosmid unclonability p-value | 0.0655357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCGA TCACGGTGTC GGTGGACCCG GTGGACCCGG TGGACCCGGT GGACCCGGTG GACGCCGTGG TCGCCGCGGG ATCAGACGGG CTCACTGTGG CCCGCATCGA GTCCGAGATC GGGGCCTTGG AGTTCCTGAA CGAACTGCGC ACTGAACTCA AGAGTGGACA GTTTCGACCT CAACCGGTGC GGGAACGCAA GATCCCCAAA CCGGGCGGGT TGGGCAAGGT ACGGCGGCTG GGGATTCCCA CAGTGGCCGA CCGGGTCGTT CAGGCGGCGT TGAAACTGGT GCTAGAACCC ATCTTTGAGA CCGACTTCGA GCCGGTCTCC TACGGGTTTC GGCCCGCGCG ACGCGCGCAC GACACGATCG CTGAGATTCA CTTGTTCGGC ACCCAGGAGT ATCGCTGGGT GCTCGACGCT GATATCAAGG CGTGCTTTGA CCGCATCGAC CACGCGGACC TGATGGACCG GGTGCGTCAC CGGATCAAAG ACAAGCGGGT GTTGCGGCTG GTGAACTGGC AGCGCATTCG GCATCGCTGG AATTGGACCG ACGTCCGCCG CTGGCTCACC GACCCCACCG GGCGGTGGCA CCCCATCAGC GCGGACGGGA TCACCCTGTT TAACCCCGCC GCGGTGCCCA TTCGGCGATA CCGCTATCGG GGCAACACGA TCCCCACTCC CTGGACTCAG GCTGTCTGA
|
Protein sequence | MSSITVSVDP VDPVDPVDPV DAVVAAGSDG LTVARIESEI GALEFLNELR TELKSGQFRP QPVRERKIPK PGGLGKVRRL GIPTVADRVV QAALKLVLEP IFETDFEPVS YGFRPARRAH DTIAEIHLFG TQEYRWVLDA DIKACFDRID HADLMDRVRH RIKDKRVLRL VNWQRIRHRW NWTDVRRWLT DPTGRWHPIS ADGITLFNPA AVPIRRYRYR GNTIPTPWTQ AV
|
| |