| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2382 |
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| Symbol | |
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| ID | 5204796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2968399 |
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| End bp | 2969985 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640600645 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001281272 |
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| Protein GI | 148654179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.029605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTA AACCAAATAG CACCACTCAG AACAAAAACG TCCGTGTCGC TGTGATTAAT
ACCTTGTTGT CTATTCAACA AGGTCAGTCA CTAAGCGGTC TTTTAGATCC TTTATTAAAC
AGTCTAAATG GGGATGACAA AGGCTTTGCG CATGCCTTAT TGCTGACGAC TTTACGCCAC
TGGCACGCCA CGGCACGGCT GCTTGATAGC CTCGCGGATA ACCCAATTGA TGAGATTGAG
GTGCGAACCA CCATCCAACT GGGCATTACT CAGCTGTTAT ATCTTAATGT TGCCGATCAC
GCCGCTATCC ATGAAACCGT AGAAGCGGTG AAACACATTG ACTACGCACG TGCCTCAGGT
TTGGTCAATG CGGTACTACG CAAAGTGGCG AAAAATCCCA ATAAATTCCG CAAAAAAGCC
AACAAAAACC ACAGCTTACC GAACTGGCTG GCTCAGCAGT TAAAAGTAGA TTGGCGTGAG
CATTATGATG AGCTGACCCA AAGCCTGCGT CAATCCGCAC CGATGTTTTT GCGGGTAAAT
GGCTTGCAAA CAGACAGCCA AAGCTATCTT GCTCAGCTGA CAGAGGCGGA TATTGCTGCA
GAGTTAATAG CTTTAGAAAC CTCCCTGAAG ATGCCTGATA CGGGCGAAAC TATCGGTATT
AAACAACAGG CTATTGAACT GATTGACAGT GTCCCTGTCA GCCGTCTGCC TGAGTTTGAG
GAAGGCATTG CGAGCGTGCA AGATGCGCAT GCACAGCTGG CTGCGCCTAT TATCGATGCG
TTATTGCAGC AAGTGATGAG CGCCAATCCA GCGGAACACA TACGTTTGCT GGATGCGTGT
GCGGCACCGG GTGGCAAACT GGCACATTGG CTTGAGCTAT TAGGTAATCA AGAAAAGCAA
CAAACAGGAT TGTTTCACGT GAAACAGTCT GATAGTCAAG AGTCAACTAT TGATAAAGTT
AAATTGACTG CGATTGATAA TGAAGCGCCA CGTATCACGC GTATTTTTGA AAACTTAGAG
CGTTTGCAGC TGCCAGCGCC TATCGTTAAT AGCAAGCTAC ACTTGGATAT TGAGTGCGTG
GATGCGACCA CTTGGCAAGC CAAAGCGGTG AGTGCTGACT CATCTGGCTT TGATGCGATA
TTGCTCGATG CGCCCTGTAC AGCCACCGGT GTTATCCGCC GTCATCCAGA CATTACCTTG
CTGCGTAATG AGGAAGACGT GCAGCATACC GTACAATTAC AAGAGCAAAT CTTGGATAAC
TTATGGCCAC AGCTTAAGAC AGGCGGCTAT TTGTTATACG TGACCTGTTC GATCTTAAAG
CAAGAAAACG TAGAGCAAAT GCAAGCCTTC TTAAGCCGTC ATAAAGATGC GGTAGCAATC
GCTTTTGACA GTGAAACCAA CTGGGGTATC GAGCAAGAAG TGGGTCGTCA GTGCTTACCG
ATCTATAAAA TGACTGAAGC ATTAGCGCCC ATAGCGGCTC AAGATGACAC ACCAGAGGCT
GCTAAGGTGC AAGTCAACGC CCAAGCGCCT GCAGGTGGTG ATGGGTTTTA TTATGCAGTG
CTTAAAAAGC AGGGTAGTGA TTCATAA
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| Protein sequence | MSSKPNSTTQ NKNVRVAVIN TLLSIQQGQS LSGLLDPLLN SLNGDDKGFA HALLLTTLRH
WHATARLLDS LADNPIDEIE VRTTIQLGIT QLLYLNVADH AAIHETVEAV KHIDYARASG
LVNAVLRKVA KNPNKFRKKA NKNHSLPNWL AQQLKVDWRE HYDELTQSLR QSAPMFLRVN
GLQTDSQSYL AQLTEADIAA ELIALETSLK MPDTGETIGI KQQAIELIDS VPVSRLPEFE
EGIASVQDAH AQLAAPIIDA LLQQVMSANP AEHIRLLDAC AAPGGKLAHW LELLGNQEKQ
QTGLFHVKQS DSQESTIDKV KLTAIDNEAP RITRIFENLE RLQLPAPIVN SKLHLDIECV
DATTWQAKAV SADSSGFDAI LLDAPCTATG VIRRHPDITL LRNEEDVQHT VQLQEQILDN
LWPQLKTGGY LLYVTCSILK QENVEQMQAF LSRHKDAVAI AFDSETNWGI EQEVGRQCLP
IYKMTEALAP IAAQDDTPEA AKVQVNAQAP AGGDGFYYAV LKKQGSDS
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