Gene PsycPRwf_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2376 
Symbol 
ID5204790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2961031 
End bp2961819 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID640600639 
ProductSUA5/yciO/yrdC domain-containing protein 
Protein accessionYP_001281266 
Protein GI148654173 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATC GGCGGTCTAT TGTGTCAATG AAGTCTGAAA CTATGAATGC TACTACTGAG 
CCGAATGGCG CTACCACCAC AAGCCCTGAA CAAGCCGCAC AATGGCTACA GCAAGGCAAA
CTTCTGGCTT ATCCCACCGA AAGCGTCTGG GGTATAGGCT GTGATGCTTA TAACCAACAA
GCCGTTGAGC AGATATTGGC CATAAAAAAC AGGCCAAGCG AGAAGGGGAT GATCGTGGTG
ACTGACAGCA TTGAGCGTAT CAGGCCATTA TTACAGCAAT TACCCCAGAG TCGTCAGCAG
CAAATCATAG CCAGTTGGTC AACGCGAGCA AGTGAGGAGA ATGCAGCACA CACTCAGCAG
GCGCACACTT GGCTATTGCC TTTAAAGACG GCTGAATTTA GCGCAACAAC AGAAGCGGAT
CACGAAGATA CGAATACTCA AGATATTGGT GCTCACAAGG CTAATGCTAG CAAGGCTCAT
GACCCACACC AACCCGGCAA CGAAGCTTTG GTACCTTATT GGATTACCGG CAAACATGAT
TCTATTGCGG TTAGAGTGAT TGCGCATCCA CTTATTGCTC AGCTGTGTCA GCAAATGGTC
AGCTCTGCCA ACCCTTATGG GTTAGTGGTC TCAACCAGCT GTAACCCATC AGGAGACTCT
CCGGCTAAGA GTTTTGAGCA GGCCTATGCC TACTTTGGGC AAGACATAGC GTATCTACAA
GGAGAGACTT TAGGCTATGT GCTACCTAGT CAGATCAGTG ATGCATCAAG CGGGCAGGTG
ATTCGTTAG
 
Protein sequence
MAYRRSIVSM KSETMNATTE PNGATTTSPE QAAQWLQQGK LLAYPTESVW GIGCDAYNQQ 
AVEQILAIKN RPSEKGMIVV TDSIERIRPL LQQLPQSRQQ QIIASWSTRA SEENAAHTQQ
AHTWLLPLKT AEFSATTEAD HEDTNTQDIG AHKANASKAH DPHQPGNEAL VPYWITGKHD
SIAVRVIAHP LIAQLCQQMV SSANPYGLVV STSCNPSGDS PAKSFEQAYA YFGQDIAYLQ
GETLGYVLPS QISDASSGQV IR