Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2364 |
Symbol | |
ID | 5206456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2947864 |
End bp | 2948724 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600627 |
Product | band 7 protein |
Protein accession | YP_001281254 |
Protein GI | 148654161 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTT TGAGTATCGT GATGATTGTC TTGGTGGCCT TGGTGGTGTT TACCATCTTT AAAGGCGTCA GAATTGTGCC GCAAGGGTAT AAGTGGATTG TGCAGCGCCT AGGTAAGTAT CATCAAACCT TAGAGCCGGG TTTAAACTTA ATTATTCCTT ATGTGGATGA TGTGGCTTAT AAGCTCACCA CCAAAGACAT CGTGTTAGAC ATCCCTTCAC AAGAGGTGAT TACCCGCGAT AACGTGGTAA TTATTGCCAA CGCCGTGGCT TATATCAGCA TCGTACAGCC CGAAAAAGCG GTCTATGGTA TTGAAGATTA TGAGCATGGT ATCCGTAACT TAGTACAAAC CTCACTGCGC TCTATCATAG GTGAGATGGA TTTAGACAGT GCCTTATCAA GCCGTGATCA GATTAAAGCC TTGCTTAAGC ATGCCATCTC AGAGGATATC GCCGATTGGG GTATTACTCT AAAAACAGTT GAAATTCAAG ATATTAACCC ATCAGACACG ATGCAAACCG CTATGGAAGA GCAGGCTGCC GCAGAGCGTC AACGCCGTGC TACCGTAACG CGTGCCGATG GTCAAAAACA AGCGGCTATC TTAGAGGCTG ATGGCCGTCT TGAAGCCTCA CGCCGTGATG CAGAAGCTCA AGTGGTACTG GCCAAAGGGT CAGAGGAGTC TATTCGCTTA ATCAGTCAAG CGATGGGCAA AGAGGAGATG CCTGTGGTGT ATCTATTGGG TGAGCAGTAT ATCAAGGCCA TGCGTGAGCT GGCCGAGTCG GACAATGCCA AAACGGTGGT ATTGCCTGCC GATATCTTAA GTACAGTAAA AGGCATGGTG GGCAATAAGT TTCAACCTTA A
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Protein sequence | MNSLSIVMIV LVALVVFTIF KGVRIVPQGY KWIVQRLGKY HQTLEPGLNL IIPYVDDVAY KLTTKDIVLD IPSQEVITRD NVVIIANAVA YISIVQPEKA VYGIEDYEHG IRNLVQTSLR SIIGEMDLDS ALSSRDQIKA LLKHAISEDI ADWGITLKTV EIQDINPSDT MQTAMEEQAA AERQRRATVT RADGQKQAAI LEADGRLEAS RRDAEAQVVL AKGSEESIRL ISQAMGKEEM PVVYLLGEQY IKAMRELAES DNAKTVVLPA DILSTVKGMV GNKFQP
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