| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2348 |
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| Symbol | |
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| ID | 5206298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2923589 |
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| End bp | 2925013 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640600611 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001281238 |
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| Protein GI | 148654145 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.152585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA CAGTACCCTC TGATGCAATA CCATCTGCAC CAAGCTCTAG ACCGACAAAA
GATCACAGTA AGGCGATAGC TGAGCTAAAA GCACAATTTG GTGACAGGCT TAGTACCAAT
CTAACCACCC GTCAGCAGCA CGCACATACC ATGACGTGGC TCGAGAGCCA GCCGGCTGAT
GCGGTGCTTG TGGCCCGTGA TAAGCAAGAA GTCGCCCAAG CTGTCGCGAT TTGTAATACT
CACAACATGC CAGTGATTGC TTTTGGTATT GGCTCATCCT TAGAGGGGCA GCTAAATGCC
CCTTATGGCG GTCTGTGTAT TGATATGAGT GAGATGAATG AGATTTTGCA GGTCAATAGT
GAGGACTTAA CCGTAACGGT TCAGCCTGGG GTGACCCGTG AGCAGCTCAA TCACTATTTG
CGTGATACAG GACTATTCTT CCCGATTGAT CCTGGGGCTA ATGCCACTAT CGGTGGTATG
GTCGCCACTC GCGCATCAGG CACCAATGCG GTGCGCTACG GCACCATGAA AGACGTGGTA
TTGGCATTAG AGGTAGTGAC AGCAGAGGGT AAAGTTATCA AGACAGGCTC GCGTGCCAAA
AAGTCAGCCG CAGGCTATGA CTTAACCCGC TTGATGATTG GCTCAGAGGG TACGTTAGGT
GTGGTCACTG AGATTACTCT AAAGCTTTTT GGCATCACAG AATGTATCGG CAGCGGAATT
TGTCATTTTC CCACTGTGGA AGCGGCGTGT GAGGCGACCA TGATGACCAT TCAAATGTGC
TTGCCCATTG CCCGTATTGA GCTGTTAGAT ACCTTGCAGG TCAAAGCGTG TAATCAGTAC
TCTAACCTCA CGCTAAAAGA GATGCCGACC TTATTTGTGG AGTTTCATGG TAGTACAGCT
GGCGTGCAAG AGCAGGCACA GATCTTTAAT GATATTGTAG AGGAGTGTGG CGGCTCAGAC
TTTGCGTGGG ACAGTGATGA AGAGGCACGC AAAAAGCTGT GGCACGCGCG TCACAACGCC
TATCCTGCCA GCCGTGCGTT ACGCCCAGAG GCTCAAGCCT TATCAACCGA TGCCTGTGTG
CCCATCTCAA GGCTGGCCGA ATGCGTCAGC GAGACGGCCA AAGATATTAA AGAGGCTGGC
ATGATTGGCC CTATTGTCGG TCACGTAGGC GATGGTAACT TCCATGTATT GTTGCTCGTT
GACACCGACA ATCCTGATGA GGTACAGACG GCTGAAGACT TGGTTGGTCG TCTGGCAAAA
CGTGCCATCG ACATGGATGG CACCTGTACT GGGGAGCATG GTATTGGTCA GGGCAAGCGC
AAATATATGG CGTATGAACA TGGCGATGCC GTAGGGATGA TGCAAGCCAT TAAGCACGCA
CTTGACCCGA ATAATATCTT AAACCCAGGC AAGATTTGGC CGTAA
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| Protein sequence | MTTTVPSDAI PSAPSSRPTK DHSKAIAELK AQFGDRLSTN LTTRQQHAHT MTWLESQPAD
AVLVARDKQE VAQAVAICNT HNMPVIAFGI GSSLEGQLNA PYGGLCIDMS EMNEILQVNS
EDLTVTVQPG VTREQLNHYL RDTGLFFPID PGANATIGGM VATRASGTNA VRYGTMKDVV
LALEVVTAEG KVIKTGSRAK KSAAGYDLTR LMIGSEGTLG VVTEITLKLF GITECIGSGI
CHFPTVEAAC EATMMTIQMC LPIARIELLD TLQVKACNQY SNLTLKEMPT LFVEFHGSTA
GVQEQAQIFN DIVEECGGSD FAWDSDEEAR KKLWHARHNA YPASRALRPE AQALSTDACV
PISRLAECVS ETAKDIKEAG MIGPIVGHVG DGNFHVLLLV DTDNPDEVQT AEDLVGRLAK
RAIDMDGTCT GEHGIGQGKR KYMAYEHGDA VGMMQAIKHA LDPNNILNPG KIWP
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