Gene PsycPRwf_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2346 
Symbol 
ID5206296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2921606 
End bp2922700 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID640600609 
Productmembrane protein putative toxin regulator-like protein 
Protein accessionYP_001281236 
Protein GI148654143 
COG category[R] General function prediction only 
COG ID[COG3641] Predicted membrane protein, putative toxin regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.143914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAT CGGCCTCTGC TCATGTTTTA CCTGTCTTTG TGCGTGACTT TTTTAACAAA 
TATTTTATTG ATGCCTTTAC TGGTATGGCG TTAGGGCTGT TTGTCACTTT AATTGCGGGG
CTTATTTTCT CCCAAGTGGG CATGGCGTTA GAGATGCCAC TGCTGATGGA TTTGGGCAAG
TTGGCCTCTA TCTTGATGGG CGCAGGCATC GGTGTGGGCA TTGCCTATTA TCTCAAGGCG
CCGACGTTGG TGGTGTTTGC CTGCTTAGTG GCTGGCATGA TGGGCGCTCA TTCTGAGGCG
TTAATGGCCG GTCAATTATT CACGCCGCAA GCGAGGGCGC CTGCTACCTT TTTGGCCGTA
CCAGGCAATC CGATCGGTGC TTATTTGGCC ACTGTCTTTG CCTACCGTGC CGGCAGCTGG
GTACAAGGTA AGACCAAGCT TGATATTATC TTAGTGCCTT GGGCAGTAGG ACTGGTAGCG
TTGGCCGTGT GCGCTTGGCT TAATCCGCCT GTGGTCAGTG TGGTCAACAG TATTGGTGAC
GGCATTGCGC TGGCCACGCA GTTGCAGCCA TTTATGATGG GCGTGGTCAT CGCTGTGGTG
GTGGGCCTGC TGCTGACCAT GCCGACCTCA AGTGCCGCCA TTTGTATTGC TATTGGGCTA
GATGGTCTGG CCGGCGGTGC GGCTGTGGTT GGCTGTGCGG CGCATATGAT TGGCTTTGCG
GTGGCAAGCT ACAAAGACAA CGGCATCAGC GGCGTCATTG CCCAAGGGCT TGGCACCAGT
ATGCTGCAAA TTCCCAATAT CTTCAAAAAG CCAATTATTT TGCTGCCAGT TGTGATTGCC
AGTGCCGTTG TCGGACCCAT AGCAACTACT GGGTTTGGAC TCATGAGTAC CGCCAGTGGT
GCTGGTATGG GGACCGCGGG TTTTGTGGGT GTATTTGGGG TGCTTGAGGC ATCAGCAGGT
AGTCTAACGC TCAGCAATAT TTGGCTGGCA ATTGTGCTGT TGATGTTTGT GTTACCGGCA
CTAATCGCTG GGCTAGTGGC GTGGTGGATG CGCCGAATGG GCTGGATAGC GCCAGGAGAT
ATGACATTAC CCTAA
 
Protein sequence
MTSSASAHVL PVFVRDFFNK YFIDAFTGMA LGLFVTLIAG LIFSQVGMAL EMPLLMDLGK 
LASILMGAGI GVGIAYYLKA PTLVVFACLV AGMMGAHSEA LMAGQLFTPQ ARAPATFLAV
PGNPIGAYLA TVFAYRAGSW VQGKTKLDII LVPWAVGLVA LAVCAWLNPP VVSVVNSIGD
GIALATQLQP FMMGVVIAVV VGLLLTMPTS SAAICIAIGL DGLAGGAAVV GCAAHMIGFA
VASYKDNGIS GVIAQGLGTS MLQIPNIFKK PIILLPVVIA SAVVGPIATT GFGLMSTASG
AGMGTAGFVG VFGVLEASAG SLTLSNIWLA IVLLMFVLPA LIAGLVAWWM RRMGWIAPGD
MTLP