| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2339 |
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| Symbol | |
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| ID | 5206289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2911150 |
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| End bp | 2913543 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600602 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001281229 |
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| Protein GI | 148654136 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.608898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.596694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACC GTTATCTATC CTTGATGATT TTAGTTATTT CTCACTCTTC TTTCGCACAA
GATGACATGC CTTACTCACC GCCTATTAGC GATGACGACA TCACTCACCC CGAAGTCGTA
CTGCCGACCA TCACCGTAAA ATCAGCAGCC AGTCCAGTCT CCAGTCACAC GGTCACAATA
CAGGATCAAC AGATTGATAC GCATACATTA GGCGAGGCGT TAGAGAAGAT ATCAGGGGTT
CACTCTGGTA GTTTTGGCCC ACACTCAGGC TCGCCTATAA TTCGCGGATT ACAAGGCAAT
CGCGTTAGTA TCAATGAAGA TGGTACGAAT GTTAATGGGC TCAATGCCAT CAGTCCAGCG
ACCAACTTGC TGTTTGATCC GGTATTTAGT CAGCAGATTA CAGTGAACAA GAACAACTCA
GTCATTGAGT CAGGCGGGCG TGCCATCGGC GGCAGTGTGG AGATTGACAG TGGATTAATC
TCGCGGCAAA TAGAGGACAA ACCTCAAAAT CTCACGCTGG CTATTAAAGA TGGAACCAAT
GCCCCTCGCT CACAGGGCAT AAAAGCCAAT ATGAATAACG AGGACAATCT AAGCATTAAT
CTGTTGTACT CGGCGCAGCG CCAAGGGCAT TACGATATTC CTGGTGATAG CAAGGCCAAG
GTCTGCCAAA CAGACCTGGT TCGCAGCAAT GAATACGGCT TGGGGGTAAA TACAGTATTA
GCAGACGCCT GCCAAAAGCA TGTCGAAAAA ACCACCATCT TTAACCCCAA ATCGAGACAG
TATTTTTATA CCGATTATGT TGACCCGAGC ACGCTTGAAT ATACGCAGAC CTATTATGAC
TATGGCTTAT CGCCAGGGGA TGTTTATACC AATTATGGCG GCTATGGTAC GGCAGAGAAC
CCGCAATACG AGCCAGATCA GCCCGAATAT GCCGAGCGCA TTAGCAAGAT TAACGATGTG
ACAGAGAATT ATCATAATAA GCTTGGGAAC AGCCATTTAG ACAATCGCCG CTTGGGGATA
TCGGGTAGTT ATTTTTTTGA TAATGGTTAT GTTGCTGCTG CTTTGGATAA CAAAACCAGC
CGTTACGGCT TGCCTGGGTT TTCAATGTCC AATCTAAATT ACAATCAAGA TTACACTGCA
AATGTCCCAG TACAAATCGA TGCGGAGCAG ACGAAGTATC TGCTAGAGTC GCAAGTTGAT
TTGACGTACG ACTGGTTCAA TCAGCTTAAT GTGAATATGG CCCATATCAA GGAGCGTAAT
GAGGAGCTGC TGGGTGATGA TGTCGCCAAT CATTATGACT TTGATACTTA TAATGCCACT
GTAGTGACTC AGCATCAGCC AAGTCTAGGT AAGCTTGGCG TGCTATCTGG AAAGCTGGGC
GCTGATTTGT CGTATCGTGA TATTAGGGGT AGGGGTGAGC AGCGTTACCT GCCGGATGTC
GATACCCAAA AGCAGGCACT GTTTGTCAAA GAAAGTCTGC CGCTAGATTA TCTGACATTA
GGGGCAGGCT ACCGCTATGA GAAAGTGACA CACAAGATTC AAGGCAGCGA TTTTAGCCCC
TCTAGCAAGT CACCGAATTA TGAAAAACTG CTCGATACGG ATTTTAATCT AAACAGTTAT
GAGCTGTCCG CCAAGCTGGA TGTCAATGAC TATTTGGCAT TTAACCTGCG TTATGCCAAC
TCTGAGAGAG CCCCCGAGGT GAATGAGCTG TATGCCAGTC AGGCGCACTT TAGCAGTATG
GCGCATGAAG AGGGTAATCA GACACTAGAT TCAGAAAAGG TCGCCAGTAC CGAGCTTAGT
GCACTGATTA ACTATCAAGA TATCGACGTT GTCGCCACTG CGTATCAACA TGATTTTGAT
GGTTATTATT CGCTTAGACC CTCAGGGACG ACCTTTTTGG CCAATCGGTT GCCTTTAAAG
TATTGGCAAC AAATAGATAC TAAGGTGAGC GGCTTTGAGA TTGATGCAAG CAAACGCTTT
GATTTTGATC AATATGGCGA TGTGACGGCG CATCTTTTTG CTGATTTGGT GAAGAATAAG
CCCAAAGACG GTGAGACAAA TGGCGAGTAT CTCACCAATA TCCCAACCGA CCGTTATGGC
ATTGGTCTTA ATTGGCAAAA CAACCGCTGG GAGAGTGAGA TAAACTTTGT GCACTACGCT
AAGCCCAAGT ATTTAGGGAA AGAGATTAAC ACTGAGGTGG CACTGCCCAG CTATAACATG
ATGGATGTGA GTATAGCCAA AACCATTAAT GGTTGGGCCG ATTCTAGGGT TAAGCTCTTT
GCTAATGCCA GTAACTTATT GGATGAAGAG GCCAGACCGC ACGCATCGCC TCTAAGATAC
ATTGCTCCAT TACCAGGGCG TAGTATCAAT GCCGGCATTA CGGTTGATTT TTAG
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| Protein sequence | MQYRYLSLMI LVISHSSFAQ DDMPYSPPIS DDDITHPEVV LPTITVKSAA SPVSSHTVTI
QDQQIDTHTL GEALEKISGV HSGSFGPHSG SPIIRGLQGN RVSINEDGTN VNGLNAISPA
TNLLFDPVFS QQITVNKNNS VIESGGRAIG GSVEIDSGLI SRQIEDKPQN LTLAIKDGTN
APRSQGIKAN MNNEDNLSIN LLYSAQRQGH YDIPGDSKAK VCQTDLVRSN EYGLGVNTVL
ADACQKHVEK TTIFNPKSRQ YFYTDYVDPS TLEYTQTYYD YGLSPGDVYT NYGGYGTAEN
PQYEPDQPEY AERISKINDV TENYHNKLGN SHLDNRRLGI SGSYFFDNGY VAAALDNKTS
RYGLPGFSMS NLNYNQDYTA NVPVQIDAEQ TKYLLESQVD LTYDWFNQLN VNMAHIKERN
EELLGDDVAN HYDFDTYNAT VVTQHQPSLG KLGVLSGKLG ADLSYRDIRG RGEQRYLPDV
DTQKQALFVK ESLPLDYLTL GAGYRYEKVT HKIQGSDFSP SSKSPNYEKL LDTDFNLNSY
ELSAKLDVND YLAFNLRYAN SERAPEVNEL YASQAHFSSM AHEEGNQTLD SEKVASTELS
ALINYQDIDV VATAYQHDFD GYYSLRPSGT TFLANRLPLK YWQQIDTKVS GFEIDASKRF
DFDQYGDVTA HLFADLVKNK PKDGETNGEY LTNIPTDRYG IGLNWQNNRW ESEINFVHYA
KPKYLGKEIN TEVALPSYNM MDVSIAKTIN GWADSRVKLF ANASNLLDEE ARPHASPLRY
IAPLPGRSIN AGITVDF
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