| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2335 |
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| Symbol | |
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| ID | 5205650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2904432 |
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| End bp | 2906006 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600598 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001281225 |
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| Protein GI | 148654132 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0988959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.193339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTG TAAACTCTCA AAACACAGAG TCTTCTGCTG AATTTAAGGG ACTAGACAAT
GGCTTTATGG GGCATCCCCA GCCGCTACGT TCCTTATTCT TCACCGAAAT GTGGGAGCGC
TTTTCTTACT ACAGTATCCG CCCTTTACTG GTGCTGTTTA TGGTGGCCTC TATTAGTAAT
GGTGGCTTTG GATTCGATGA TACCACTGCG ACTGCCATAT ATGGTATTTT TGCCGGAACT
TTGTATCTTG CTGCGGTACC AGGTGGCTGG CTTGCTGATA ATTGGTTAGG TCAAGAGCGT
GCCTTATGGT GGGGCAGTAT CATCATTGCG CTGGGCCACT TATGTATCGC TTTGTCTGCC
TTATTTGGCA TGTCTATGTT TTTTATTGGT CTGGTCTGTA TTGTGCTAGG TTCAGGCTTA
TTTAAAACCT GTATTTCAGT GATGGTCGGC GCTTTATATC CCAAGGGTGA CTCGCGCCGT
GACGGTGGTT TTACCCTGTT TTATATGGGC ATTAACATTG GTGCCTTATT GGCTGCACTG
ATTGTTGGTG TGTTTAAAGA ACAGCAAATG TGGCATGTTG GCTTTGGTGT CGGTGGTTTG
GGTATGTTGG TGTCGTTATT GGTATACCGT TTTGCTGCCC GCAAAAACCT AAAGCGCTTT
GCGAAAGCCA AAGGCATCAC CCCTGAATGG GAAGTGGCCA ACGATCAGTA TCAAAATGTC
GGCCGCTGGG TGGGTCTATT TTTAGCGATT TTAATTGCGC TCATTGTTCT TGTGGCTACT
GGTGTTATGC CTTTTAACCC CAGTCTGGTT GCCGAATACA TGACCTATGT TATTGCCGCC
ACTGTGCTGC TGTATTTTGG TTATATGTTT GTCTCCCCTA AGCTTGATAA GACCGATAAG
CTGCGTTTGC TGATTTGTTT TATTTTAATC ATCGGCTCAA CGTTATTCTG GTCAAGCTTT
GAGCAGCAGC CCACTTCATT TAACTTGTTT GCCGATCGTT ATACCGATCT TAATGTCATG
GGCTTTGATG TACCAAGCAT TTGGTTCCAG TCATTAAACC CCATCTTTAT CCTAATGCTG
GCGCCCATTG TGAGTATCAT TTGGGTGTGG TTAGGTAAGC GTAATCTTGA ACCTAACAGT
ATGGCCAAGT TCTCTTTGGG TATGCTATTG GCGGCAGCAG GGTTTGGTTT GATGACGATG
GCCTCTAAAC TGGTGGTCGC TAATCCAGAC ACTCTAGTAT CGCCTTTGTG GCTCACAGGC
AGTTTGTTGT TATTAACTTT GGGTGAGTTG GCATTAAGTC CTGTCGGTTT ATCTTCAATG
ACTAAGCTTG CGCCAAAAGG CATGCAAGGT CAAATGATGG GTCTGTTCTT CACTTCTGTG
GCCATGGGTA ACTTAGTTGC TGCCTTCTTT GGCGGTCATG TGTCAGCGGA CACCATTGAT
GGCTTGCCTG GCCTGTTCAC TACCATGACC ATCTTCTTGG TAGTGACCGC TTTAATCTTG
CTGGCTTTAT CAAAACCGGT CAGAGCCATG TTAGACCGCA GTGAAGCGGA AGATGAACGC
CGCAATGCTG TTTAA
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| Protein sequence | MSSVNSQNTE SSAEFKGLDN GFMGHPQPLR SLFFTEMWER FSYYSIRPLL VLFMVASISN
GGFGFDDTTA TAIYGIFAGT LYLAAVPGGW LADNWLGQER ALWWGSIIIA LGHLCIALSA
LFGMSMFFIG LVCIVLGSGL FKTCISVMVG ALYPKGDSRR DGGFTLFYMG INIGALLAAL
IVGVFKEQQM WHVGFGVGGL GMLVSLLVYR FAARKNLKRF AKAKGITPEW EVANDQYQNV
GRWVGLFLAI LIALIVLVAT GVMPFNPSLV AEYMTYVIAA TVLLYFGYMF VSPKLDKTDK
LRLLICFILI IGSTLFWSSF EQQPTSFNLF ADRYTDLNVM GFDVPSIWFQ SLNPIFILML
APIVSIIWVW LGKRNLEPNS MAKFSLGMLL AAAGFGLMTM ASKLVVANPD TLVSPLWLTG
SLLLLTLGEL ALSPVGLSSM TKLAPKGMQG QMMGLFFTSV AMGNLVAAFF GGHVSADTID
GLPGLFTTMT IFLVVTALIL LALSKPVRAM LDRSEAEDER RNAV
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