Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2334 |
Symbol | |
ID | 5205649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2902452 |
End bp | 2904275 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640600597 |
Product | peptidase M24 |
Protein accession | YP_001281224 |
Protein GI | 148654131 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.565369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.315472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGT CTGTCATCCA AGAGCGTATC CATCAATTAC GCCAAGTTCT AAAAAATAAC GAAATCAGCG CCCTGATCAT CCCATCGGCT GATCCTCATT TATCTGAGTA TCTGCCTGAG TATTGGCAGG GTCGTCAGTG GCTATCGGGC TTTACAGGCT CTGTGGGTAC TTTGGTTGTG ACTCATGACT TTGCAGGTCT GTGGGCGGAC AGCCGTTATT GGGTACAAGC AGCGGCACAA TTAGAGGGGA CTGGTATTAC CCTACAAAAA CTACAACCAG GCTCTCCTAA TCACGCCCAG TGGCTGGGTG AGTATTTAAA GGCCGGCGAT AGTGTGGCCA TCGATGGCAA TGTGTTGTCA CTGGCTGAAC AAGATCGCCT GTTAGATGCT TTCGATGAGG CGGCTGAAAG TGAAGAGGAG GGTATCCGTC TGGTCACTGA GCTGGATTTA TTAGGCGAGA TTTGGCAAGA CCGTCCGGCG CTGCCTGTGG CTCAGCTTTA TCCCCATGAT ACGCAGTTTG TGTCACAGTC GGCGCAAGAG AAGCTGGCCG AAGTGCGGGC GCATATGGCG CAAATTGGCG CCACCCATCA CCTCATCTCA AGCTTAGATG ATATCGCGTG GCTGACCAAC TTACGTGGCA GTGATGTCGA TTACAACCCT GTATTTTTGG CACACATGAT AGTCACTGCA GATAAGGCAA CGCTTTATAT TGAAAATGCC AAGGTGGGCG AGGATATCGC CAAATTATTA AGTGACGCCG GTATGAGCGT GGCAGATTAT GATCAAGTTC AAAGTGCTTT AAGTGAGCTA ACGCCAGAGG ATTTATTGTT ATTAGATCCC AATAAGGTGG CAGTAGGCAC CTTAAATGAC TTAGGCGATG ACATTGCTAT GATTGAGCAA GTTGCGCCAA GCACATTGCT AAAATCCGTC AAGTCTAAAG AGGATATCGA GCATGTGCGT GAGGCCATGC GTCAAGATGG TGCGGCATTG TGTGAGTTCT TTAGCGAGTT TGAAGCACGT CTACATCAAG GCGAACGCTT AAGCGAGCTT GATGTGGACA GTATGTTGAT TGATGTGCGT AGCAAACAGC CGCACTATGT ATCACCAAGC TTCCCAACCA TTGCCGGCTT CAATGAAAAT GGGGCGCTGC CACATTACCG TGCCACAGAA GACAAATTTA GCTACCTTGA CGGTGATGGA CTGTTATTAA TTGACTCTGG TGCTCAGTAC CAAAACGGCA CCACCGACAT TACCCGTGTG ATTGGTATTG GCCAAGTTAA TGAGACGCAA AAACGTGACT TTAGCATGGT GTTAAAAGCA CACATTGCTT TAGCCAAAGC CTGTTTCCCA GATGGGATTG CTTCACCACT GATTGATGCG ATTTGCCGTG CACCACTGTG GCAAGCCCAA ATGGATTACG GTCATGGTAC CGGCCATGGT GTTGGCTACT TCTTAAATGT GCATGAAGGC CCACAAGTCA TTGCTTATGC GGCGAGCAAC CCACCAGAGC GTGCCATGAA GGTGGGTATG ATCTCAAGTA ATGAGCCTGG TTTGTACCGT GAAGGCCGCT GGGGGATTCG CATCGAAAAC CTAGTGGTGA ACCAGCCTGT GCCAACACCG CAAGAGACTG AGTTTGGTCA TTATCTAAAC TTTGAAACGG TTACGTTATG CCCCATTGAT ACCCGTTTGG TAGAGCCAAG CTTGCTTAAC CAAGACGAAA TAGAGTGGTT GAACGACTAC CACAGCCACG TATTCAATGA GCTAAAAGAC CGTGTTTCAG GGGCGGCTTT GGCGTGGCTG ACTGAGCGCA CAAAAGCCAT TTAA
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Protein sequence | MSKSVIQERI HQLRQVLKNN EISALIIPSA DPHLSEYLPE YWQGRQWLSG FTGSVGTLVV THDFAGLWAD SRYWVQAAAQ LEGTGITLQK LQPGSPNHAQ WLGEYLKAGD SVAIDGNVLS LAEQDRLLDA FDEAAESEEE GIRLVTELDL LGEIWQDRPA LPVAQLYPHD TQFVSQSAQE KLAEVRAHMA QIGATHHLIS SLDDIAWLTN LRGSDVDYNP VFLAHMIVTA DKATLYIENA KVGEDIAKLL SDAGMSVADY DQVQSALSEL TPEDLLLLDP NKVAVGTLND LGDDIAMIEQ VAPSTLLKSV KSKEDIEHVR EAMRQDGAAL CEFFSEFEAR LHQGERLSEL DVDSMLIDVR SKQPHYVSPS FPTIAGFNEN GALPHYRATE DKFSYLDGDG LLLIDSGAQY QNGTTDITRV IGIGQVNETQ KRDFSMVLKA HIALAKACFP DGIASPLIDA ICRAPLWQAQ MDYGHGTGHG VGYFLNVHEG PQVIAYAASN PPERAMKVGM ISSNEPGLYR EGRWGIRIEN LVVNQPVPTP QETEFGHYLN FETVTLCPID TRLVEPSLLN QDEIEWLNDY HSHVFNELKD RVSGAALAWL TERTKAI
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