| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2319 |
|---|
| Symbol | |
|---|
| ID | 5206535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2886828 |
|---|
| End bp | 2887757 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640600582 |
|---|
| Product | phosphoribosyl-AMP cyclohydrolase |
|---|
| Protein accession | YP_001281209 |
|---|
| Protein GI | 148654116 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000743372 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.240259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTC ACAATACGCA AACTGCCAAG CCACAACAGA TGACAGATGC CAATACCGCT
TGGTTAGAAC AAGTAACTTT TACCGCTGAT GGCCTCATTC CCGCCATTGC ACAAGACAAA
GACAGCGGCG AAATCCTAAT GATGGCTTGG ATGAATAAAG AGGCATTGCA TCTGACTGCG
CAGACCAAAA CTGCCGTGTA TTTTTCACGC TCGCGCGGTA AGCTGTGGCA CAAGGGGGAG
AGCTCAGGGC ACACTCAAAT TGTGCATGAC ATTCATCTAG ATTGTGACGC GGATGTGATT
GTACTGACCG TGACCCAAAT TGGGGATATT GCTTGTCACA CAGGACGCAG ATCGTGCTTT
TATCGTAAGC TTGACCTATC CGGTGGGGCG CCAAGTTGGC AGACCGTCGC TCCGGTATTA
AAAGATCCTG ACGCCATCTA TGGCACTACT GCATCTGAGT CTGCCAATGA TATAATAGCG
GCTCAGCATA CTGCTCAAGA TGACAGTACT GACACCTATG CGCAGCCAGC ATCACAGACA
CAAGCTCACA GCGTATTACA ACAGCTAGAT GCGGTATTAG TGGCGCGCAA AAAGGCCGAT
GCCAACAGCT CTTATGTGGC AAGCCTTTAT GCCAAAGGTC TTAATAAGAT TTTGGAAAAA
GTAGGTGAAG AAGCAGTAGA GAGCATTATT GCGGCCAAAG ACTTGGCTGC GCTAAGCCAG
GTGTCTGCAC CTAATACCCA AAACTCTGAG CCGCTAGATG AGGTACAGCA AGCCTTAAGC
GATGATTTGA TCTATGAGAT TGCTGATGTG TGGTTTCACA CTTTGGTCAC ATTGGCATGG
TTTAATATCG GGTCCGATCG CATACTGGCT GAGTTGGCGC GCCGCTTTGG CCTCTCAGGC
ATCGAAGAGA AAAATAGCCG CCCCCATTAA
|
|---|
| Protein sequence | MSSHNTQTAK PQQMTDANTA WLEQVTFTAD GLIPAIAQDK DSGEILMMAW MNKEALHLTA
QTKTAVYFSR SRGKLWHKGE SSGHTQIVHD IHLDCDADVI VLTVTQIGDI ACHTGRRSCF
YRKLDLSGGA PSWQTVAPVL KDPDAIYGTT ASESANDIIA AQHTAQDDST DTYAQPASQT
QAHSVLQQLD AVLVARKKAD ANSSYVASLY AKGLNKILEK VGEEAVESII AAKDLAALSQ
VSAPNTQNSE PLDEVQQALS DDLIYEIADV WFHTLVTLAW FNIGSDRILA ELARRFGLSG
IEEKNSRPH
|
|---|
| |