| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2312 |
|---|
| Symbol | |
|---|
| ID | 5206133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2879388 |
|---|
| End bp | 2880266 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640600575 |
|---|
| Product | protein of unknown function, zinc metallopeptidase putative |
|---|
| Protein accession | YP_001281202 |
|---|
| Protein GI | 148654109 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000120651 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.307835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGC GTGGTAGAAG TGGCAGCTCA AACGTACGTA TGAGTGGCGG TAAGGCTGCA
GGTGGTGGTA TCTTTGGTAT TATTATTGGT TTGGTATTGT GGCTGGTATT TGGGGTGAAC
CCCATGACCG CTTTTCAGAC AGGCCAATCT ATGACAGCAG GCAGTAGCAG CAGCACGCAG
CCTCTCGATG ATGAAGGCCG CGATGCACAA TTCGTATCTG TGGTATTAAA GGACACTGAA
GCGGTTTGGC AAGAGGTATT TCAAGAACTA GGTAGCCGCT ATCAGGAGCC TACCTTGGTG
CTGTTCAATG GTAGTGTTAA TTCAGCTTGC GGTAGTGCCA CCTCAGCGAC CGGCCCATTT
TATTGCCCAG GCGATCAGCA AGTGTACTTG GACACCTCAT TTTTTGCAGA AATGCGTCAC
AATTTAGGTA TTACCGGCGA TCAACAAGGA TCAGGTGATT CTGAAAACGC AGACAAAGCA
GGCGACTTTG CTCAAGCCTA TGTCATTGCG CATGAGGTCG GCCACCATGT TCAGACCCTG
CTTGGTACCT CACAAAAGGT AAATGAAGCA CGCCGCCAAT TGAGTGAAGC ACAAGGCAAT
CAGCTCTCAG TTCGCCAAGA GTTACAGGCT GACTGTTATG CTGGGGTGTG GGCCAACCGC
AATCAACAGC GCGTTCAGTT TTTGGAAGAG GGTGATATCG ATGAGGCACT ACAAGCGGCC
AGTCAAATTG GCGATGATCG CTTAGCACAA GCCAGTGGCC GTGCTGTTAT GCCTGATAAC
TTCACCCATG GTACCAGCCA GCAGCGCGTT AACTGGTTTA CTCGTGGCTT TCAAAGTGGC
GATATCCGTA ATTGTGATAC CTTCTCAGGA GCGATTTAG
|
|---|
| Protein sequence | MKWRGRSGSS NVRMSGGKAA GGGIFGIIIG LVLWLVFGVN PMTAFQTGQS MTAGSSSSTQ
PLDDEGRDAQ FVSVVLKDTE AVWQEVFQEL GSRYQEPTLV LFNGSVNSAC GSATSATGPF
YCPGDQQVYL DTSFFAEMRH NLGITGDQQG SGDSENADKA GDFAQAYVIA HEVGHHVQTL
LGTSQKVNEA RRQLSEAQGN QLSVRQELQA DCYAGVWANR NQQRVQFLEE GDIDEALQAA
SQIGDDRLAQ ASGRAVMPDN FTHGTSQQRV NWFTRGFQSG DIRNCDTFSG AI
|
|---|
| |