| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2296 |
|---|
| Symbol | |
|---|
| ID | 5205993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2863405 |
|---|
| End bp | 2864691 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640600559 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001281186 |
|---|
| Protein GI | 148654093 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000281941 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000367197 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAA CCAAAGCGCT TAATGCCTTA AAGCTTCTTT CTCCTAATAG CATACAACAT
GCCGGCTACC TAGCTGTTGC CAAGACCCGT GCCAAAGCTT TACATGCCTT TGCAATGGTC
GCTCCCATTC CAAGACCTCA ATTATTTATC GGCGAACAAT CCTGTTATGA GCTGTGCGAT
TTGATGATTA ATGAAGGCGC TACCAATGTA CTAATCGTCA CTGATGCGGT ATTAAACCAG
TTGGGTGTTC CCGAAAAAGT CACTACTTAT TTAGAAGATA AACGCGTCAG CTATCATTTG
TTTGATGGTA TTACGCCAGA CCCTACCTTT AGCGTGGTAG AAGAAGGGTT GCGCCACTCT
GTGGACAATC ACTGTGATGC CATTTTGGCC ATCGGCGGTG GCTCGGTTAT CGATGCCTCA
AAAATTATTG CGATGAGTCA GGCCACCAAG CGCAAACCTC AACAATTAAT GGGGTTATTA
AAAGCCTCTA AATGCATGCC TTTATATTGT ATCCCCACCA CAGCAGGTAC CGGTTCTGAG
GCAACATTAG GCGCGGTAAT TTCAGATGAC AAGACTCACC AAAAGTCTTT ATCCATTGAT
CCACGCATGG TACCTCTAGC CTCAGCGGTA GACCCTGTGA TTATGAAAGT CATGCCGCCC
CACATTACTG CCGATACCGG TATTGATGTG CTAACCCATG CTTTAGAGGC GTGGATGAGT
GCCAATGCCA GCAGTGAGAC TGACTACTAT GCCGCCTCTG CCACTAGAAC GGTGATGCAG
TATCTGCCGC AAGCGTATAA AGATGGCTCG GATCTAAAGG CTCGAGAAGA GATGGGTGTG
GCTGCGCACT ACGGCGGTAT TGCTTTTAAT AAGGCCGGCT TGGGATATGT TCACGCCATC
GCTCACCAGT TAGGGGCGTT CTATGGTATT CCTCATGGCC GTGCTAACGC CATCGTATTA
CCGCATATCT TAGAAATTAA CCGAAAGGTA TCACAGCACA GATTGGCGGC CTTGGCCAAA
AAAGTAGGGA TTTTAGGGGC AGCTGATACC CATGCTGAAG ACAGCGAGCT GACTGACCAT
TTGATTGCTA AAGTGAAAGC CTTAATTGCT TCTCTAAACA TCGATGTCAC GGTTAAAGGT
ATTGATCCGG CTGACTTCAA AAAGATGGCC AAAGCGGCTG CCAAAGAAGT CAGTGATACT
TATGCGGTGC CAAGATATCT GACCTCAGCA CAGATTATTG ATATTTTAAA TGACATCAAG
GCCGAAAGCG ATGCGCTTGC CAAATAA
|
|---|
| Protein sequence | MHATKALNAL KLLSPNSIQH AGYLAVAKTR AKALHAFAMV APIPRPQLFI GEQSCYELCD
LMINEGATNV LIVTDAVLNQ LGVPEKVTTY LEDKRVSYHL FDGITPDPTF SVVEEGLRHS
VDNHCDAILA IGGGSVIDAS KIIAMSQATK RKPQQLMGLL KASKCMPLYC IPTTAGTGSE
ATLGAVISDD KTHQKSLSID PRMVPLASAV DPVIMKVMPP HITADTGIDV LTHALEAWMS
ANASSETDYY AASATRTVMQ YLPQAYKDGS DLKAREEMGV AAHYGGIAFN KAGLGYVHAI
AHQLGAFYGI PHGRANAIVL PHILEINRKV SQHRLAALAK KVGILGAADT HAEDSELTDH
LIAKVKALIA SLNIDVTVKG IDPADFKKMA KAAAKEVSDT YAVPRYLTSA QIIDILNDIK
AESDALAK
|
|---|
| |