Gene PsycPRwf_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2285 
Symbol 
ID5205579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2850979 
End bp2851503 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID640600547 
Productriboflavin synthase 
Protein accessionYP_001281175 
Protein GI148654082 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0439709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATT TACAAAAAGA ACGTGAGGCC ATTACTCATA TTGAAGGCAA TTTATACCAA 
AACAAAGACG CACGCATTGG TATTGTTGTG GGTCGTTTTA ACGCTTTTGT TGTTGAGTCA
TTAGTAGATG GCGCCATTGA TGCATTATTA CGTCACGGCG TCTCAGGCAA CAACATCAGT
GTGATTCGTG TTCCTGGTGC TTTTGAATTA CCCTTGACTG CGCAGCGTGC CGCAGAATCA
GACCGCTTTG ATGCCGTTGT GGCATTAGGC GCGGTTATCC GTGGTAGTAC CCCGCACTTT
GATGTGGTGG CTAACAGCTC TGCAAGTGGT TTGGCCAGCG TGTCTATGGA TTACAATATT
CCAGTGATTA ACGGTATCTT AACGACAGAC ACCATCGAGC AAGCCATTGA ACGTTCAGGC
ACCAAAGCGG GCAACAAAGG CGCTGAAGCG GCCATGGTTG CTCTTGAGAT GATCGCCGTA
TTGTCTCAGC TTGATGTTGA CTATGAAGAT CAAGACCAAG ACTAG
 
Protein sequence
MQDLQKEREA ITHIEGNLYQ NKDARIGIVV GRFNAFVVES LVDGAIDALL RHGVSGNNIS 
VIRVPGAFEL PLTAQRAAES DRFDAVVALG AVIRGSTPHF DVVANSSASG LASVSMDYNI
PVINGILTTD TIEQAIERSG TKAGNKGAEA AMVALEMIAV LSQLDVDYED QDQD