Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2284 |
Symbol | |
ID | 5205578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2850081 |
End bp | 2850839 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600546 |
Product | NusB antitermination factor |
Protein accession | YP_001281174 |
Protein GI | 148654081 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0460977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA AAAATCCGGC ACAAACTGAA GACAACCGTC TAAATGAGCA TCAATCAAAT GACCAGTTTG ATATCAATGA ATCTAGTTAT AAAACTAGCC ACGCAGCTGT GCGTAAGGCA CGTCGCTTTG CACTACAAGG ATTGTATGAG TGGTTAATGA CGGATCATCG CTTCGAGCAG ATGGGGCAGG GGGAGTGGAA AGCGAACCCA CCTCATGACA TCGCCGCCCG TACACGTGCC ACCAATGCCA TGCATACCGT ACATTTGGGT TACTATCATA CCTTAATGCG CGAAATCCCT GAGCAGATTA CTGATCTTGA GGCACTTATT GCTCAGCATT TAGATCGGGC CATCGATAAG ATTGATATGG TAGAGCATGC GGTGCTACTT ATCGGTGCTT ATGAGCTAAA AAATAGCCTG CATATCCCTT ATAAAGTGGT GCTTGATGAA GCCATGAAGC TCAACACCCA CTTTGGTGCC ACAGATGCCC ACAAACTGAT TAATGCTGTG ATGGATAAGT TGGCGGCTCA ATTACGTACC GTGGAAGTAG AGGCTGACAC GGGTACAGGC TATAAACACA AAAAACAGCA GCACTCTCAA CAGCAGCAAA GTCAAAGTGC AGATGAAGCA CCGATGGTGG CCACTCAATC AGCAAGTGAC GAGACAGCAG AGGGGTCAAG CGCTGAGCAA TCAAGCAATG AGATAAGTGA AGTATCACGT CAGCCTAAGC CGAGAATTGG ATTAAAACCA AAAAAATAG
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Protein sequence | MSNKNPAQTE DNRLNEHQSN DQFDINESSY KTSHAAVRKA RRFALQGLYE WLMTDHRFEQ MGQGEWKANP PHDIAARTRA TNAMHTVHLG YYHTLMREIP EQITDLEALI AQHLDRAIDK IDMVEHAVLL IGAYELKNSL HIPYKVVLDE AMKLNTHFGA TDAHKLINAV MDKLAAQLRT VEVEADTGTG YKHKKQQHSQ QQQSQSADEA PMVATQSASD ETAEGSSAEQ SSNEISEVSR QPKPRIGLKP KK
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