Gene PsycPRwf_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2284 
Symbol 
ID5205578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2850081 
End bp2850839 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content46% 
IMG OID640600546 
ProductNusB antitermination factor 
Protein accessionYP_001281174 
Protein GI148654081 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0460977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA AAAATCCGGC ACAAACTGAA GACAACCGTC TAAATGAGCA TCAATCAAAT 
GACCAGTTTG ATATCAATGA ATCTAGTTAT AAAACTAGCC ACGCAGCTGT GCGTAAGGCA
CGTCGCTTTG CACTACAAGG ATTGTATGAG TGGTTAATGA CGGATCATCG CTTCGAGCAG
ATGGGGCAGG GGGAGTGGAA AGCGAACCCA CCTCATGACA TCGCCGCCCG TACACGTGCC
ACCAATGCCA TGCATACCGT ACATTTGGGT TACTATCATA CCTTAATGCG CGAAATCCCT
GAGCAGATTA CTGATCTTGA GGCACTTATT GCTCAGCATT TAGATCGGGC CATCGATAAG
ATTGATATGG TAGAGCATGC GGTGCTACTT ATCGGTGCTT ATGAGCTAAA AAATAGCCTG
CATATCCCTT ATAAAGTGGT GCTTGATGAA GCCATGAAGC TCAACACCCA CTTTGGTGCC
ACAGATGCCC ACAAACTGAT TAATGCTGTG ATGGATAAGT TGGCGGCTCA ATTACGTACC
GTGGAAGTAG AGGCTGACAC GGGTACAGGC TATAAACACA AAAAACAGCA GCACTCTCAA
CAGCAGCAAA GTCAAAGTGC AGATGAAGCA CCGATGGTGG CCACTCAATC AGCAAGTGAC
GAGACAGCAG AGGGGTCAAG CGCTGAGCAA TCAAGCAATG AGATAAGTGA AGTATCACGT
CAGCCTAAGC CGAGAATTGG ATTAAAACCA AAAAAATAG
 
Protein sequence
MSNKNPAQTE DNRLNEHQSN DQFDINESSY KTSHAAVRKA RRFALQGLYE WLMTDHRFEQ 
MGQGEWKANP PHDIAARTRA TNAMHTVHLG YYHTLMREIP EQITDLEALI AQHLDRAIDK
IDMVEHAVLL IGAYELKNSL HIPYKVVLDE AMKLNTHFGA TDAHKLINAV MDKLAAQLRT
VEVEADTGTG YKHKKQQHSQ QQQSQSADEA PMVATQSASD ETAEGSSAEQ SSNEISEVSR
QPKPRIGLKP KK