| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2272 |
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| Symbol | |
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| ID | 5206348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2834837 |
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| End bp | 2836837 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600534 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001281162 |
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| Protein GI | 148654069 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATG AACAACACAC CATTAAGACG CCAGCGCACC GTAATGTAAA GGATGAGCGC
TTCGATGAAG AGGCTCGCGA CTTAACCCGC AGCCTGCCGG CGTCAAGAAA AATATATATC
GAGGGCTCTC GTCCTGATAT TCAAGTGCCG ATGCGTGAAA TCACTTTAAC CGATACGCCC
ACTGGCGGCT TTGGCCTAGA AAATGGGGAA AAAAATCCCC CGTTTTATGT GTATGACACC
TCGGGTGTGT ATACCGACCC GAGTGTCGAT ATTGATTTGA CCAAAGGCTT ACCAAAGCTA
CGTGAAAAAT GGATTGAAGA GCGTGGCGAT ACCGAAGTTT TAGACGGCTT ATCAAGCAAC
TATGGTCAAG AGCGTGCGCG TGATATCAAA ACCGCCAACA TCCGTTTTGC TCATATTGAT
AAACCTCGCC GTGCCAAAGC TGGCAAAAAT GTCACTCAAA TGCATTATGC CCGCCAAGGT
ATTATCACGC CTGAGATGGA ATACATCGCC ATCCGTGAGA CCCAAAAGCA GCATGAATTA
ACCGATATGC GCCAACATGC CGGCGAGACC TTTGGCGCTA ATACCCCCAA AATCATTACC
CCTGAATTTG TACGTGCTGA AGTGGCCGCT GGACGCGCTA TTATCCCCAA TAATATTAAT
CACCCAGAGT CTGAGCCGAT GATTATCGGG CGCAACTTTC TGGTAAAGAT TAATGCCAAT
ATCGGTAACT CAGCGCTGGG CTCAAGCATT GATGAGGAAG TATCCAAGAT GACCTGGGCT
ACCCGCTGGG GCGCCGACAC CATCATGGAT TTATCGACCG GTAAGAATAT TCATGAAACT
CGTGAATGGA TTATCCGCAA CTCGCCTGTA CCCATTGGCA CTGTCCCTAT TTATCAAGCA
TTAGAGAAAG TTGACGGCGT CGCTGAAGAC TTAACGTGGG AGATTTTCCG CGATACATTA
ATTGAGCAAG CCGAGCAAGG CGTGGATTAC TTTACTATTC ACGCCGGCGT GCTACTGCGC
TATGTACCCC TAACTGCAAA ACGTCTAACT GGCATTGTGT CGCGCGGCGG CTCTATCATG
GCGCAGTGGT GTCTTGCTCA TCACAAAGAA AGCTTCTTGT ATACCCATTT TGAAGACATC
TGCGACATCA TGAAGCAGTA TGACGTGGCC TTTAGCTTAG GCGATGGCCT ACGTCCAGGC
TGTTTGCAAG ACGCCAATGA TGAGGCTCAG TTTGGCGAGC TGAAAACCTT AGGCGAGCTG
ACTCAAGTGG CTTGGAAGCA TGATGTACAG GTGATGATTG AAGGGCCAGG TCATGTGGCG
ATGAACCGCA TTAAAGAGAA CATGGATTTG CAGCTTGAGA TGTGTTCTGA GGCACCTTTT
TATACCCTTG GTCCATTAAC CACAGACATC GCGCCAGGCT ATGATCACAT TACCAGTGCT
ATTGGCGCCG CTATGATTGG CTGGTTTGGC ACGGCAATGC TGTGTTATGT GACCCCAAAA
GAGCATTTAG GTCTGCCTAA TAAAAAAGAC GTGAAAGATG GCATCATCAC TTACAAAATC
GCCGCTCACG CCGCTGACCT AGCCAAAGGC CACCCTGGCG CTCAGGCACG TGATAATGCG
TTATCGAAAG CCCGCTTTGA GTTCCGCTGG GATGATCAGT TTAATCTAGC CTTAGATCCA
GACACGGCTC GTGAATTCCA TGATGAAACA CTGCCAAAAG ATGCGCACAA GTCTGCCCAT
TTCTGCTCTA TGTGTGGGCC TAAGTTTTGC TCAATGAAAA TCACCCAAAA TGTGCGTGAG
TATGCAGCCG GCCTGCCTAC CGGTGTTGAG GTCACCCCAA GCAGTGGCGA GCTTAGTGAT
GCGGTGCATC TTATCAAAGA GGTCGACACT GAACTGGTTA AAAAAGTAGG TGAAGCCAGT
TTTGAAGAGG TACAAAAGGG CATGGCTCAG ATGACAGAGA AGTATAATAG CGAGGGACGC
CAGCTTTATA AAGAGGTGTA A
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| Protein sequence | MSNEQHTIKT PAHRNVKDER FDEEARDLTR SLPASRKIYI EGSRPDIQVP MREITLTDTP
TGGFGLENGE KNPPFYVYDT SGVYTDPSVD IDLTKGLPKL REKWIEERGD TEVLDGLSSN
YGQERARDIK TANIRFAHID KPRRAKAGKN VTQMHYARQG IITPEMEYIA IRETQKQHEL
TDMRQHAGET FGANTPKIIT PEFVRAEVAA GRAIIPNNIN HPESEPMIIG RNFLVKINAN
IGNSALGSSI DEEVSKMTWA TRWGADTIMD LSTGKNIHET REWIIRNSPV PIGTVPIYQA
LEKVDGVAED LTWEIFRDTL IEQAEQGVDY FTIHAGVLLR YVPLTAKRLT GIVSRGGSIM
AQWCLAHHKE SFLYTHFEDI CDIMKQYDVA FSLGDGLRPG CLQDANDEAQ FGELKTLGEL
TQVAWKHDVQ VMIEGPGHVA MNRIKENMDL QLEMCSEAPF YTLGPLTTDI APGYDHITSA
IGAAMIGWFG TAMLCYVTPK EHLGLPNKKD VKDGIITYKI AAHAADLAKG HPGAQARDNA
LSKARFEFRW DDQFNLALDP DTAREFHDET LPKDAHKSAH FCSMCGPKFC SMKITQNVRE
YAAGLPTGVE VTPSSGELSD AVHLIKEVDT ELVKKVGEAS FEEVQKGMAQ MTEKYNSEGR
QLYKEV
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