| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2261 |
|---|
| Symbol | |
|---|
| ID | 5204982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2823731 |
|---|
| End bp | 2824216 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640600523 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001281151 |
|---|
| Protein GI | 148654058 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA GCGTTTCTAG CAGTGAATTT TTAAGCGAGC ATATTAAGCC GCCTGAAGCT
TTAGCCGGCT TTGGCAGTAT TTATGTGCAA AATGTGGTCT GGAATGACAT GGATGCCTTT
AATCATGTCA ACAACGTGGT CTATTACCGA TATGCGGAGT CGGCTCGTAT CAATTATCTT
AATGAGCTGG GCGCTTTTAG TAATGAGGTG ACGACCGTAT TGGCGCAGTC GAGCTGTACT
TATTTAAAGC CTGTGGTATT CCCAGATACT TTGTTAATCG GCGTGCGTAC TAAAAAGCTA
GGTAATACCA GTATTATTAT GGAATACGCT TACTTTAGTA CCGCTCAGCA AGCTTTAGTG
GCCACAGGAG AGTCAGTGCT GGTGCGTCTA AATAAAGAGG GTACAAAGAA GCTGCCTTGG
TCGACGACCG AGCGCAGCAA TATATTGGCC TTTGAAAAGG CTGCCGGCCA CAGTCCCCAA
ATCTGA
|
|---|
| Protein sequence | MSQSVSSSEF LSEHIKPPEA LAGFGSIYVQ NVVWNDMDAF NHVNNVVYYR YAESARINYL
NELGAFSNEV TTVLAQSSCT YLKPVVFPDT LLIGVRTKKL GNTSIIMEYA YFSTAQQALV
ATGESVLVRL NKEGTKKLPW STTERSNILA FEKAAGHSPQ I
|
|---|
| |