| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2255 |
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| Symbol | |
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| ID | 5204976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2800401 |
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| End bp | 2802290 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600502 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001281145 |
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| Protein GI | 148654052 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAACT ATACCGCCCA ATCGCTCGAA GTCTTAGAAG GGCTTGAGCC GGTCCGTCGT
CGCCCTGGTA TGTATACCGA TACCACACGG CCCAATCACC TTGCGCAAGA GGTGATCGAT
AACTCAGTGG ATGAAGCCTT AGCGGGCCAT GCTAAGACTA TCAAAGTACA ACTGCACAAT
GATGGTTCGT TATCTGTGGA AGATGATGGA CGCGGTATGC CCACTGATAT TCATCCTGAA
TTCAAGCAAA CAGGTATTGA AATTATCTTA ACTCGCTTGC ATGCTGGGGG TAAGTTTAAT
ACCAGCAACT ACCAAGTTTC CGGGGGATTG CATGGGGTAG GCATCTCAGT AGTGAATGCC
TTATCTAAAC GTGTAGAGGT GACCGTTTGG CGTGATGGTA GCCAATATGA TATTGCCTTT
GAAAATGGAG CGCCGGTCAC TGAGTTGGTT GAGTCTGTGA GCTCTAATAA GCGCAAAAAA
GGGACGAAAG TTCGTTTTTG GGTGGATGAA TCCTTTTTTG ACACTCCCAA ATTTAGCGTA
AAGCAGCTTA AGCATAACCT AAAGGCCAAA GCGGTATTAG CAGCTGGTCT GACTATTGAA
TTCTTCGATG AGATTAATAA TGATAAAGTG GTCTGGCAGT TTGCTGATGG GGTCGTTGAA
TACCTAAACG AACAGCTTGA TGGCCTAGAA ACACTACCAC CAGAGCCGTT TTATTTTTCT
TATGAAGCAA AAGAAGGGGA GCGCTCAGGG GTAACCTTTG CTTTGTCATG GCTGCCCCAA
GGTGGCACAC CAATTCAAGA AAGTTATGTT AACTTGATTC CGACTGCCCA AGGCGGCACG
CATGTTAATG GTCTGCGTAC CGGTATTTTA GAAGCCTTAC GTGAGTTTTG TGAAATTCAT
AACTTACTGC CGCGTAATGT TAAACTGACC GGTGAGGATG TGTGGGATGG GGTTAACTAC
ATCTTATCGC TGAAGTTCTC AGAGCCACAG TTCTCAGGGC AGACAAAAGA GCGTTTATCT
AGTCGAGAAG CAGCAGGTGC GGTGCAGGCT CAGGCCAAAG ATGCTTTTAG CTTATGGTTA
AACCAACATG CTGATTTAGG AGCGCAAATT GCTGAGCTCG CTATTTCTAA AGCAGGCAGA
CGTTTAAAAT CGGCCAAAAA AGTGGCGCGT AAAAAAATCA CGCAAGGCCC AGCGCTACCT
GGTAAATTAG CTGACTGCCG TGGTGGAGTG CGAGATGGTG CTGAGCTGTT TTTGGTTGAG
GGTGACTCAG CTGGGGGGAG TGCTAAGCAA GCACGTGATC GACATTTTCA AGCGATTTTG
CCATTAAGAG GTAAGATCTT AAATACTTGG GAGGTCTCAC CTGATACAGT ACTTTCAAGT
CGTGAGATCC ATGATATCGC CATTGCTATT GGTGTGGACC CGGCATCAGA TGATTTATCA
GAGCTGCGTT ACGATAAGGT ATGTATCTTG GCCGATGCTG ATTCAGATGG ACTACACATT
GCCACACTTA TTTGTGCGCT GTTTGTGAAG CACTTCCCAG CTTTGGTCGA TGCAGGGCAT
TTGTTTGTGG CTATGCCGCC CTTATATAGA ATTGATATCG GTAAAGAGGT GCATTATGCG
CTGGATGAAA GTGAGCTTGA GCATATCTTA AGTAATGTAC CTGGCAATAA AAAACCACAA
ATCACCCGGT TTAAAGGTCT GGGCGAAATG AGCGCCGAGC AGCTGCGTGA GACTACCATG
AACCCAGATA CGCGAAGATT GGTGCAATTA GATATGGATG ACATGCAGCT AACCAATAGT
GTGATGGATA TGCTATTGGC CAAAAAACGA GCCGGTGATC GTAAAACGTG GTTAGAGAGC
AAGGGAGATC TTGCTGAGAT TATGGTCTAA
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| Protein sequence | MSNYTAQSLE VLEGLEPVRR RPGMYTDTTR PNHLAQEVID NSVDEALAGH AKTIKVQLHN
DGSLSVEDDG RGMPTDIHPE FKQTGIEIIL TRLHAGGKFN TSNYQVSGGL HGVGISVVNA
LSKRVEVTVW RDGSQYDIAF ENGAPVTELV ESVSSNKRKK GTKVRFWVDE SFFDTPKFSV
KQLKHNLKAK AVLAAGLTIE FFDEINNDKV VWQFADGVVE YLNEQLDGLE TLPPEPFYFS
YEAKEGERSG VTFALSWLPQ GGTPIQESYV NLIPTAQGGT HVNGLRTGIL EALREFCEIH
NLLPRNVKLT GEDVWDGVNY ILSLKFSEPQ FSGQTKERLS SREAAGAVQA QAKDAFSLWL
NQHADLGAQI AELAISKAGR RLKSAKKVAR KKITQGPALP GKLADCRGGV RDGAELFLVE
GDSAGGSAKQ ARDRHFQAIL PLRGKILNTW EVSPDTVLSS REIHDIAIAI GVDPASDDLS
ELRYDKVCIL ADADSDGLHI ATLICALFVK HFPALVDAGH LFVAMPPLYR IDIGKEVHYA
LDESELEHIL SNVPGNKKPQ ITRFKGLGEM SAEQLRETTM NPDTRRLVQL DMDDMQLTNS
VMDMLLAKKR AGDRKTWLES KGDLAEIMV
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