| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2229 |
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| Symbol | |
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| ID | 5205284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2769375 |
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| End bp | 2770481 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640600476 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001281119 |
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| Protein GI | 148654026 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.626337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC TCAAACTACG CATTAAAGAC AAGCACATAA AAGAGCTGAA TCGGATAAGC
GGTTCGGTAA ACTTCGTGTG GAACTATGTT AATGCGCTGT GCTTTGAGCA TCTAAAACGT
ACTGGTAAGT TTTTTAGTGC TTATGATCTA AGTGAGTACA CCAAAGGAAG CGGTGAGTAT
TTAGGATTAC ACAGTCAGAC TTTACAAGCT ATCAATGAGA CTCACGCCAA ATCTCGTAAG
CAATTTAAAA AAGCCAAACT TAACTGGCGC AGCAATCGTC CTGATGCCAA ACGTAAATCC
CTTGGCTGGA TACCTTTTAA GAAATCGGCT ATTAAATACC TAAGCACAAG ACAAACAGGT
AAAAAAGCAC TTAAATCAAC TCTTCAATTA TCACTATCCA AAGGTCAAAA GCTCATCATT
GATATATTTG ATAGCTATAA TCTAAGCCTA TATCAAATCA ACACGCTTGA GATAGTGCAA
GACAGCCGTA ATCGTTGGTA TGCGTGTATT ACCGTTAAAG ACTTTCCTAA GCAATTTAGT
GGCAAAGGTA GCGTTGGTAT TGATTTGGGC TTAACAGAGT CTGCCACTAC ATCAAACGGT
GACAAGCTGA CTATTAAGCA AACGCAAAAA TGGGCGAATA AATTAGCAGT AGCCCAGCGT
GCTAAGAATA AAAAGCATGT CAAAGCAATA CATGCCAAAA TTAAAAATAC AAGATTAGAC
TTAATTCATA AATTCACCAC CAAGCTAGTG CAGAGTAATG CCTTAATTGT GGTCGGTGAT
GTTAAATCAC GCTCATTTAC AACTAAAAAG ACCAAAATGG CTAAATCGAC ATACGATGCA
GGATGGTTTG AACTTAAACG ACAACTGGAA TACAAATGCA AGCATGCAGG TTGTCAGCTT
GAGATCGTAA ATGAGAGTTA CACTACCCAG ACCTGCTCGT ACTGCCGCCA AGTAAGTGAC
AGTAGTCCGA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG CAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHIKELNRIS GSVNFVWNYV NALCFEHLKR TGKFFSAYDL SEYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR SNRPDAKRKS LGWIPFKKSA IKYLSTRQTG
KKALKSTLQL SLSKGQKLII DIFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPKQFS
GKGSVGIDLG LTESATTSNG DKLTIKQTQK WANKLAVAQR AKNKKHVKAI HAKIKNTRLD
LIHKFTTKLV QSNALIVVGD VKSRSFTTKK TKMAKSTYDA GWFELKRQLE YKCKHAGCQL
EIVNESYTTQ TCSYCRQVSD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVAIPSV
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