Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2210 |
Symbol | glyS |
ID | 5206056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2750360 |
End bp | 2752453 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640600457 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_001281100 |
Protein GI | 148654007 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACAA TTTTATTTGA ATTAGGTAGT GAAGAGCTAC CACCAAAAAG CCTAAAGCCA TTACGTGATT CGTTAAAAGC TAGTGTTGAG AGCCAACTAC AAGAGGCTAA TATCAGCTAT GACAGCCTAA AGGCCTATGC TGCGCCGCGC CGTCTGGCCA TCGAAATTGA AGGCATTAGT GAAAAGCAGC CGGACCGCAC TGAACAAAAA CGTGGACCTG CAGTAAAAGC CGCCTATGAT GCTGAGGGTA AGCCTACCCG TGCTGCAGAA GGCTTCGCTA AAGGCCTAGG TATTGATGCC AGTGAGCTTA TCACTATTGA AACGGACAAA GGCGATTACA TTGGCTATGA GCTAACCATT CAAGGTCAAG CCACCACTGA GCTGCTGCCC AATATTTTTC AAACCGCTTT AGACAATCTG CCCATTGCCA AACGTATGCG CTCAGGCGCC AGCCGCGAAG AGTTTGTGCG TCCTGTAAAA TGGTTGGTGT TGATGCAAGA TGATCAAGTG ATTGACGCCA CTGTGCAAGG TCTTGACGCC GGTAATCAGA CATTAGGTCA CCGTTATCAC TCTCCAAATC CTATCACTAT TGCGCATGCT AGCGACTATC TTAACGTGCT TGAGAATGCT AAAGTTATTG CCGACTTTGA CCGTCGTCAG CAGCTCATCA GTGAGCGCGT TACTGCCTTG GCCGATGAAG TAAATGCCCG TGCCATCGTA CCGGAAGACT TGCTCGATGA GGTGACCTCA TTGGTAGATT TACCCGTGGC ACTTCGCGCC AGCTTTGAGG AGCGCTTCTT ACAAGTGCCA CAAGAGGCGC TGATTAGCAC CATGCAGGCA GACCAAAAGT ATTTTTGTTT AACCGACAGT GAAGGCAAGC TGCAACCGTA TTTTATCTTT ATTAGTAACA TCGAATCCAA AGACCCAAGC CAAGTGGTCA GCGGTAACGA AAAAGTAGTA CGCCCACGCC TTGCTGATGC TGAGTTTTTC TTCTTACAAG ATCAAAAACA GCCACTGATC GAGATGGCCG AGAGCCTAAA AAATCGCGTC TTCCAAGACA AATTAGGCAC GATTTGGGAA AAATCTGAGC GTATTGCCAA GCTTGCTGCC TTCATTGCAG CGACTTTTAG ACAGCAAAAT ATTGCCGGCT ACGCAGACAT CGACGTGGCA CAAGCCACAC GCGCGGCCAT GTTGTCCAAA GCCGACTTAA CCAGCACGCT GGTTGGTGAG TTTCCAGAGC TACAAGGGGT GGCGGGTACT TATTATGCAC GTCTAAATGG TGAGCCTGAG GCGATTGCGG CGGCCATTGA GGAGCAGTAT TTGCCGAAGT TCAGTGGTGA CAAACTGCCA CAAACCGCTG TGGGTATTTG CTTAGCACTG GCCGATCGCA TTGATACATT AGTGGGTATC TTTGGTATTG ACCAAGCCCC TACAGGCTCA AAAGATCCAT TTAGCTTACG CCGCTCAGCC ATTGGGGTAC TGCGTATTTT AATCGAAAAA CAGCTGCCCA TTAATTTGGT CAGCTTAATT GAGCAGGCCA TTTTAAATTA CCAAGATAAA CTGCCTAAAG CGGGCGAGAC CTTAACTCAG GTTATCGACT TTATTAACTC ACGCTACCGT GCTATGTATA CCGAGCAAGG TGTGAGTGTA GATACCATTC AGGCAGTGCT CGCGATTAAC CCACACATGC CGCTTGATTT TGACCAACGT ATCCATGCAG TGAATGAGTT CCGCAGCTTG CCACAAGCAG CGACGTTGGC TGAAATTAAT AAGCGCGTGG CCAATATCTT AGCCAAATCT GAAGGTCAAG TGGGTGAGGC AGTTGATGAG TCGCTACTGA CTGAGGATGC AGAAAAAGCC TTGTATCAGG CGTTAAGTAC GGCCAAAACT GAAGTGGCGC CGTTACAAGC AGAAGCTCAG TACACTCAGA TCTTACAATC TCTTGCCACA TTAGAGGTGC CCTTGACCGG CTTCTTCGAT AATGTGATGG TCAACAGCGA AGATGAGGCA CTTAAAGTCA ATCGTTTGAC CTTGCTTAAG CAAGTACGCG AGCTGTTCTT GACGGTGGCC GATGTGGGTG AATTACAGAT TTAA
|
Protein sequence | MSTILFELGS EELPPKSLKP LRDSLKASVE SQLQEANISY DSLKAYAAPR RLAIEIEGIS EKQPDRTEQK RGPAVKAAYD AEGKPTRAAE GFAKGLGIDA SELITIETDK GDYIGYELTI QGQATTELLP NIFQTALDNL PIAKRMRSGA SREEFVRPVK WLVLMQDDQV IDATVQGLDA GNQTLGHRYH SPNPITIAHA SDYLNVLENA KVIADFDRRQ QLISERVTAL ADEVNARAIV PEDLLDEVTS LVDLPVALRA SFEERFLQVP QEALISTMQA DQKYFCLTDS EGKLQPYFIF ISNIESKDPS QVVSGNEKVV RPRLADAEFF FLQDQKQPLI EMAESLKNRV FQDKLGTIWE KSERIAKLAA FIAATFRQQN IAGYADIDVA QATRAAMLSK ADLTSTLVGE FPELQGVAGT YYARLNGEPE AIAAAIEEQY LPKFSGDKLP QTAVGICLAL ADRIDTLVGI FGIDQAPTGS KDPFSLRRSA IGVLRILIEK QLPINLVSLI EQAILNYQDK LPKAGETLTQ VIDFINSRYR AMYTEQGVSV DTIQAVLAIN PHMPLDFDQR IHAVNEFRSL PQAATLAEIN KRVANILAKS EGQVGEAVDE SLLTEDAEKA LYQALSTAKT EVAPLQAEAQ YTQILQSLAT LEVPLTGFFD NVMVNSEDEA LKVNRLTLLK QVRELFLTVA DVGELQI
|
| |