| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2194 |
|---|
| Symbol | |
|---|
| ID | 5206397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2732430 |
|---|
| End bp | 2734718 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640600441 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_001281084 |
|---|
| Protein GI | 148653991 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA TTACAACTCC CGCGTCTGTA ATTCCAAACG AAGCGATGGA TACCCGCTCT
GTGGCTGAAT TCACCGAGCA AGCTTATCTT AACTACGCCA TGTACGTGAT TATGGATCGT
GCGCTGCCAC ACATCGCTGA TGGTCTAAAG CCGGTGCAAC GCCGTATTAT CTACGCCATG
AGCGAGCTTG GACTTAAGTC TACGACCAAA CCCAAAAAAT CTGCACGTAC AGTTGGTGAT
GTGTTAGGTA AATACCATCC TCATGGTGAC ACGGCCTGTT ATGAAGCCAT GGTATTGATG
GCTCAGCCGT TTAGTTATCG CTATCCACTG ATCAGCGGTC AAGGCAACTG GGGTAGTCCA
GATGACCCAA AATCCTTTGC TGCGATGCGT TATACCGAGG CCAAAATGTC AGCCTATGCC
AACACCTTAT TGGCTGAGCT GGGGCAAGGC ACAGTCGACT GGCAGGACAA CTTCGACGGT
TCGATGCAAG AGCCGGTCAC CTTACCTGCC CGCTTGCCCA ACATCTTATT AAATGGCACC
ACAGGTATCG CTGTGGGTAT GGCAACGGAT ATCCCGCCGC ACAACTTAAA TGAAGTGGTG
CGTGCCGCCA TTCGGCTGCT AAAAAACCCC GATTTATCGG TCAAGCAATT AACCCAGTCT
ATTCCTGCAC CCGACCTGCC CACTGCTGCT GAGATCATCA CCTCTAAAAA AGACTTACAG
GCGATGTATG AAACAGGGCG CGGTAGCTAT AAGATGCGCG CGGTTTATCA TGTCGATCAA
CAAGAGAAAA ATCTGGTCAT TATCGATGCC TTGCCGTATC AAGTCTCAGG CAATAAAGTA
CAAGAACAAA TTGCCAAGCT TATGATGGAT AAGAAGCTGC CATGGGTGGT GGATATCCAT
GACGAATCAG ACCACGAAAA CGCTTGCCGT ATTGTGCTTG AGCTGCGCTC TACTCGTGTC
GATGTGGCGC GCGTGATGAG CCATTTATTT GCCAGTACTG ACCTTGAGAG CAGCTACCGG
GTCAATATGA ACATGATTGG CTTAAATGGT AAACCGCAGG TCAAAAACCT CAAAGAAGTG
CTAGAGGAAT GGCTGATCAG CCGCCGCCAA GTGGTTACTC GCCGGGTACA ATTTAGATTG
GATAAAATTG ACAAGCGCTT ACACATTTTA GCTGGTCTAC TTATCGCCTA TCTTAATATC
GATGAGGTGA TTCGCATCAT TCGTGAAGAA GACGACCCCA AACAAGAGCT AATGGGCAAA
TATGACCTCA GTGACATCCA AGCCAATGCC ATTTTAGACA TTCGTCTACG TCAATTAGCA
CGCTTAGAGG AGATTGAACT TCGCTCTGAA AAGGACGCAT TAGAGGCTGA GCGTGCCACG
CTACAAGAGC TATTAGATAA TCCTGAGAGC TTAACTCAGC TTATGATTGA AGAGCTTGAA
GCGGATATGA AAGAGCATGG CAATGATCGT ATGTCCTCTG TGGTTGAGCG TGAGGAAGCC
ACCGCATTAA AAGAGTCTGA CTTGGTGCCA AGCGAGCCGA TTACCGCCGT ATTGTCTAAA
GCAGGTTGGA TTCGTGCTGC CAAAGGTCAC GACGTTGATG CTAAAGGCAT GAGCTACCGC
TCAGGTGACA GCTATCAAGC GCATGTGCAC AGCAAATCCA ATGAGAAGAT TTATATCATG
GACAGTACCG GTCGCAGCTA TAGTATAGAG GCACATACCC TAGCCTCGGC GCGAGGTCAA
GGTGACCCAC TCACCAGCGT GTTAAAACCG CCTGCCGGTG CCAGCTTCGA GCAGCTGTTG
GCCGGTGCTG ATGATCAGCG CATTATCCTT GCCAGCTCAC AAGGCTATGG CTTTATTAAT
ACCCTAGGCA ATCTTGAGAC CAATCAAAAA GCGGGTAAAA ATGTCATTAA CTTTGATGCC
GATGCTAAGC TGTTAACGGT TGCAACCATT GATAAAACAG ACTCAGAGAC GCCAGATGAC
GCACAGGCGT TAACTCAAAA CCAAATCGCT GTGGTGACGT CAGCGGGCTA TTTGCTTATC
TTTGGGGTCG ATGAACTGCC CGAGCAGCAG CGTGGCAAAG GCAATAAGCT GATTAACCTA
AAGGCAGGCG AGGAAGTATT GGCCGTGATT GCTTTAAACA GCCATGACAG CTTAACCATC
ACCGCCGGCA AACGCCATGT AACACTAAAA CCGATGGACT TGGCCAATTA CACCAGCAAA
CGTGGCAACC GTGGCGGTCA ATTACCGCGT GGTTTTCAGA ATGTGACCCA AATCGAAGTG
ACTCAATAG
|
|---|
| Protein sequence | MSDITTPASV IPNEAMDTRS VAEFTEQAYL NYAMYVIMDR ALPHIADGLK PVQRRIIYAM
SELGLKSTTK PKKSARTVGD VLGKYHPHGD TACYEAMVLM AQPFSYRYPL ISGQGNWGSP
DDPKSFAAMR YTEAKMSAYA NTLLAELGQG TVDWQDNFDG SMQEPVTLPA RLPNILLNGT
TGIAVGMATD IPPHNLNEVV RAAIRLLKNP DLSVKQLTQS IPAPDLPTAA EIITSKKDLQ
AMYETGRGSY KMRAVYHVDQ QEKNLVIIDA LPYQVSGNKV QEQIAKLMMD KKLPWVVDIH
DESDHENACR IVLELRSTRV DVARVMSHLF ASTDLESSYR VNMNMIGLNG KPQVKNLKEV
LEEWLISRRQ VVTRRVQFRL DKIDKRLHIL AGLLIAYLNI DEVIRIIREE DDPKQELMGK
YDLSDIQANA ILDIRLRQLA RLEEIELRSE KDALEAERAT LQELLDNPES LTQLMIEELE
ADMKEHGNDR MSSVVEREEA TALKESDLVP SEPITAVLSK AGWIRAAKGH DVDAKGMSYR
SGDSYQAHVH SKSNEKIYIM DSTGRSYSIE AHTLASARGQ GDPLTSVLKP PAGASFEQLL
AGADDQRIIL ASSQGYGFIN TLGNLETNQK AGKNVINFDA DAKLLTVATI DKTDSETPDD
AQALTQNQIA VVTSAGYLLI FGVDELPEQQ RGKGNKLINL KAGEEVLAVI ALNSHDSLTI
TAGKRHVTLK PMDLANYTSK RGNRGGQLPR GFQNVTQIEV TQ
|
|---|
| |