| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2193 |
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| Symbol | |
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| ID | 5205932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2730128 |
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| End bp | 2731858 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640600440 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001281083 |
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| Protein GI | 148653990 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATC AACAAAGTCA TTTTCGTCGT AATGATAGAC CTTGGCTAAA AACCTATGAA
AAACTAGGTA TGCAATACGA CTTTGAAATG CCCGCCGCCA ACACCTCTTT AATCGAGATT
CTTGAGCACA GCTTCGTTGA GCATGAAGGC CGTACCGCTT TTGTATGCAT GAATCAAGAG
CTGTCTTATA ATGATTTAGA GCGCTATAGT CGCCAAGTCG CCGCCTATCT GCAGTCACTT
GGCCTACAAA AAGGCGATAA AGTCGCCGTG ATGATGCCCA ACATCTTACA AATGCCGTTA
ACGGTACTTG GTATTATACG TGCAGGCTAT ATTTTAGTTA ACGTAAACCC TTTATATACC
GCCCATGAGC TTGAGCACCA GTTATCTGAC TCTGAGACCA AGGTCTTATT TTTGTTAGAA
AACTTTGCCA AGACTTATGA AGACATTGGC AAAAAGATGG TCGATCAGGT GGTGGTGACC
TCAATGGGCG ACTTGATGAG CCCTGTCAAA GGCTTTATCG TTAACTCTGT AGTACGCTAC
GTTAAAAAAA TGGTGCCAGA TTATAACATT CCTGGCAGTG TAAGCTTTAA AAAAGTGCTT
AAAGTAGGCG CTGCCAAAAA ATACAAACGC CCAACCAATA TTGGCTTAGA TGATGTGGCG
GTATTACAGT ACACCGGTGG GACCACAGGT GTGGCCAAAG GCGCTATGCT TAGCCATGGT
AACTTAGTGG CCAACTTGCT ACAGGCCGAT ACTTATATTG GTAATGCTTT TGATAAATTC
ATCGAAAGAA ATGAGCAACC GGTTATTATG ACCGCATTGC CGCTATATCA TATCTTTTCA
TTCACCGTAT GCGGCATGTA TGGCCTATAT AAAGGCTGCA TTGGCTCATT GGTACCAAAC
CCCCGTGATG GCAAAAGCTT AATTAAAGCT TACAAAGACT ATCCACCTGC TTTCTTCCCT
GCGGTGAACA CTTTATTTAA CGGTTTGATT AACAGTGAGC ACTTCCGTGT TCTTGACCAT
AGCAAGCTTG AGATGTCTAT GGGCGGCGGT ATGGCGGTGC TAAAAGACAC GGCAGCTAAG
TGGAAAGCGG GTACAGGTAA CGTCATTGTG CAAGGTTACG GTCTGTCAGA AACCTCACCT
GTGGCCTCAG CCAACCCACT GGGATTAGAT GAGTTCCCAG GTAACATCGG TGTCCCATTT
CCTGGAACGG ATATGGCCAT TATTGATGAT GAAGGTAATG AAGTGGCTAT CGGTGAGCGC
GGCGAGATTT GTGTGCGTGG CCCACAGGTA ATGAAAGGCT ACTGGAAACG TGAAGATGCC
ACTGCTGAGG TTATGACTGA GGACGGTTAT TTCCGTACCG GTGATATCGG GGTGATGGAT
GAAGACGGTT ACTTTAAGAT TGTTGATCGC AAAAAAGACA TGATTATTGT ATCAGGCTTC
AACGTTTATC CTAACGAAGT TGAAGATGTG ATGAGTGGCC ATCCAAAAAT CTTAGAGTGC
GGTGTGATTG GTGTGCACAG TGATAAGAGT GGTGAAGAGC CCAAAATTTT CGTAGTACGT
AGCGATGACA GTTTAACTGA GCAAGAGGTA CTTGATTACG CCAAAGAAAA CCTAACTGGC
TATAAGCGTC CTCGCATTGT TGAGTTCGTT GATGAGTTGC CTAAATCGAA CGTGGGTAAA
ATCTTACGTA AAGATTTGCG TGAAATGGAA GCGGCGAAAA GCAAAGCTTA A
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| Protein sequence | MENQQSHFRR NDRPWLKTYE KLGMQYDFEM PAANTSLIEI LEHSFVEHEG RTAFVCMNQE
LSYNDLERYS RQVAAYLQSL GLQKGDKVAV MMPNILQMPL TVLGIIRAGY ILVNVNPLYT
AHELEHQLSD SETKVLFLLE NFAKTYEDIG KKMVDQVVVT SMGDLMSPVK GFIVNSVVRY
VKKMVPDYNI PGSVSFKKVL KVGAAKKYKR PTNIGLDDVA VLQYTGGTTG VAKGAMLSHG
NLVANLLQAD TYIGNAFDKF IERNEQPVIM TALPLYHIFS FTVCGMYGLY KGCIGSLVPN
PRDGKSLIKA YKDYPPAFFP AVNTLFNGLI NSEHFRVLDH SKLEMSMGGG MAVLKDTAAK
WKAGTGNVIV QGYGLSETSP VASANPLGLD EFPGNIGVPF PGTDMAIIDD EGNEVAIGER
GEICVRGPQV MKGYWKREDA TAEVMTEDGY FRTGDIGVMD EDGYFKIVDR KKDMIIVSGF
NVYPNEVEDV MSGHPKILEC GVIGVHSDKS GEEPKIFVVR SDDSLTEQEV LDYAKENLTG
YKRPRIVEFV DELPKSNVGK ILRKDLREME AAKSKA
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