Gene PsycPRwf_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2188 
Symbol 
ID5205927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2725197 
End bp2725631 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content46% 
IMG OID640600435 
Producthypothetical protein 
Protein accessionYP_001281078 
Protein GI148653985 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.110489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGT ATTTTAATTG GATAAAAGCG GCGCACGTCA TCTCTATGGT CTGCTGGTTT 
GCGGCTATTT TCTATTTGCC ACGGCTGTTT GTATACCATG CGATGAGTGA AGATAAGGTG
AGTCAAGAGC GCTTTGCCAT TATGGAGCGT AAGCTATATC GCGGTATCAT GACCCCATCT
ATGATAGCCA CCTGGGTATT TGGTCTATGG ATGCTTAGCT TGGAGTGGGA GGTGTATAAA
GCCCAAGGTT GGCTACATGT GAAGCTACTA CTGGTGGTGC TGTTGTCAGG CTATCATGGC
ATGTGCGGGG CTTACCGAAA AAAGCTTATC GACAATCCTC AGTACAAAAC CCATGTGTTC
TGGCGCTGGT TTAACGAAAT CCCTGTATTT GTGTTGATCG CTGTGGTGGT GCTGGTTATC
GTCAAACCCT TTTAA
 
Protein sequence
MPEYFNWIKA AHVISMVCWF AAIFYLPRLF VYHAMSEDKV SQERFAIMER KLYRGIMTPS 
MIATWVFGLW MLSLEWEVYK AQGWLHVKLL LVVLLSGYHG MCGAYRKKLI DNPQYKTHVF
WRWFNEIPVF VLIAVVVLVI VKPF