| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2173 |
|---|
| Symbol | |
|---|
| ID | 5206794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2708010 |
|---|
| End bp | 2709050 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640600420 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_001281063 |
|---|
| Protein GI | 148653970 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTAT TAAACATGGA AACCGTTAAG CAGCAGCTGA CTATGCCCAT GGCAATTGAG
GCCATTGAAC AGCTACTCAT CCGTCAGACT GAGCACCCAA ATTGGGTCAA GACGCCCGAG
CGCTTGGTCA TTCCCACCAA TAAAGATTCA GACACGCATC AGCAAGGCTC GCACTTGTCC
ATGCCCTCTG TCGTATTCGA TGGCGAGCAG GAGTATGCTG TGGTCAAATT GGTCACTATT
TGCCCAGACA ATCCGCAGCG TCAGAAGCCA ACTACTGTGG CCACTATTAC CGTATCAGAT
ACTGCGACAG GGGATACCTT GGCATTTATG GATGGCATCT ATGTCACTCA AGTTCGTACG
GCGGCTTTGT CTGGGGTTGC CACTAAGTAC TTGGCCAATC CTGAGAGCCA AACTGTGGCT
GTCATTGGCA CCGGCGGCAT GGCCTATGAG CAGCTTAATG CGGTGTTAAC CGTATGTCCT
AACATTCGCC AAGTGAACTT ATGGAACCGC AGTGGTGATA AAGCCCAGCA GTTTAAAGCA
CAGTTTATTG CTGATTACCC GCAGTGGGCC CAGCAAGGTA TCAGCGTTAA GGTATGTGAG
TCTATTGAAG CGGCTGTGGC AGAGGCGGAT GTGATTAATT TGGCCACACG GGCCACCCAA
GGGCTGTTTG AAATCGAGCA GATTAAACCC AATGCCCATA TTAATGCGGT CGGTGCTTAT
CAGCCGCATA TGAAAGAGGT GAGTTATTCG GTAATTGCGG CTTGTGACTA TGTGGTAATC
GATGATCTAG AGGGCGGTAA GCATGAAGCG GGTGACCTAA TTCAGGCCGA TGACAATGCT
GACTGCGATT GGGGCTGGGA TGAGCTAAGT GGCCAGCTAA TGGACTTGGT CAATGGTAAA
TTACAGCTAA GCGATGAGCA GGCGAAGAGC AAGCTCAGCT TATTTAAATC TGTGGGGGCT
GCAAGTTTTG ATGCAGCTGT GGCACTCAAG ATTGCCCAAT TGGCGAAGCG TGATGGGCTT
GGACAGGCTG TAGCACTATA A
|
|---|
| Protein sequence | MQVLNMETVK QQLTMPMAIE AIEQLLIRQT EHPNWVKTPE RLVIPTNKDS DTHQQGSHLS
MPSVVFDGEQ EYAVVKLVTI CPDNPQRQKP TTVATITVSD TATGDTLAFM DGIYVTQVRT
AALSGVATKY LANPESQTVA VIGTGGMAYE QLNAVLTVCP NIRQVNLWNR SGDKAQQFKA
QFIADYPQWA QQGISVKVCE SIEAAVAEAD VINLATRATQ GLFEIEQIKP NAHINAVGAY
QPHMKEVSYS VIAACDYVVI DDLEGGKHEA GDLIQADDNA DCDWGWDELS GQLMDLVNGK
LQLSDEQAKS KLSLFKSVGA ASFDAAVALK IAQLAKRDGL GQAVAL
|
|---|
| |