Gene PsycPRwf_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2168 
Symbol 
ID5204707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2704427 
End bp2704954 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content50% 
IMG OID640600415 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_001281058 
Protein GI148653965 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG TACGTCGTAA AAAACTGATA TGGGTCGCGG CTACTTTAGC AGGCGCTATT 
ATTGCCGTGC TATTGGTCAT CTACGCCATT GGGCAGCAGA CTGACTATTA CTTTGACCCG
ACTGCTATTG CTGCTGGGGA CGCACCTCAG AATAAACGCA TTCGTGCAGG CGGTATGGTG
GTGAAAGACA GTGTGCGTCG TGACCCTAAC GATGACTTGA AAGTACAGTT TGAGATCACT
GACTTTAATG CCACCGTGCC TGTCAGCTAT CAGGGCATCT TACCGGATTT ATTTGCAGAA
AACTCCGGCG TTGTTGCCAC AGGAGAGATG CAAGGCAAGG TGTTCGTTGC CAGCGAAGTA
TTGGCCAAGC ACGATGAGAA CTATATGCCT CCTGAAGTTG CCGCCTCGTT AAAAGAAGAC
CATGCTGCCA AAGGGGTTAC GCCCACCTCA GAGCAGTTTA GTCCCGCCAT TCCAGTCAAA
CAAACAGCGG GCGAAGGTAA CCACACCACA AGCACCTTAC AAGAGTAA
 
Protein sequence
MNAVRRKKLI WVAATLAGAI IAVLLVIYAI GQQTDYYFDP TAIAAGDAPQ NKRIRAGGMV 
VKDSVRRDPN DDLKVQFEIT DFNATVPVSY QGILPDLFAE NSGVVATGEM QGKVFVASEV
LAKHDENYMP PEVAASLKED HAAKGVTPTS EQFSPAIPVK QTAGEGNHTT STLQE