Gene PsycPRwf_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2135 
Symbol 
ID5206508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2659637 
End bp2660644 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content42% 
IMG OID640600377 
Product5'-nucleotidase 
Protein accessionYP_001281025 
Protein GI148653932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0823171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000198114 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTACTC AGATGGCCAT TGATTTATCT AATACCCTTA TTGTTGCAAT CTCTGCAACT 
GCACTTTTTG ATTTGAATGA ATCTGAACAG TATCGTGAGC AGTTGATTAA AAAAGATCCT
CTAACTGCTG CCCAAAGTTT TAGGGAGTAT ATGTATGAGC GTGAAAATGA GCCATTAGAG
ACTGGCGCTG GCTTTCCGTT GATTGAAGCC ATTCTTAATT TGAATAAATG TGCTCAAAAT
ACCAGTGACA GCAGTTATCA AAATAACGCT CCTTTAGTTG AAGTGGTGAT TATTTCAAAA
AGCTGTCCTG AGACAGGTAT TAGAGTGTTG AATGCTATAC GGCAGCGAGG TCTTTGCATT
ACGCGTTCCG CCTTTATTTC AGGTGCGAAA GTGGCGGATT ATATTGCAGA TTTTAAGGTG
GATTTGTTTT TGACCACAAA TCGTGAGGAT GCTCAAAGCG TGGCTGACGC TCAAATCTGC
GCTTGTGCTA TTTTAGACGC TACTCCTGTT AATACTTTTA AATTAGACAC AGATCAATTA
CGCATTGCCT TTGATGGTGA TGCGGTGCTA TTTGATGATT CAGGTGAGTT GCTATATAAG
CAAAAAGGAC TTAAAGCCTT TCATGATAGA GAGGCTAAGA TGGCGGACTT ACCCATCGAA
AAAGGGCCCT ATGCAGATTT ACTGATTAAG TTGTCGGTGT TGCAAAGAAG ATTGCCAAAT
TTAGAGGCGC AGCAGCCCAT TCAGATTGCA CTAGTGACCG CACGGAATTC GCCCGCTGAT
TTGCGCGCTA TCAAAACTTT GCGGCAATGG GGCGTTACGG TTGATATGGC TTTCTTTTTA
GGGGGGCTTG AGAAGACGGC TGTTCTTAAG AGTTTTGCCC CACATATTTT CTTTGATGAC
TCTATTCAGC ATATTGAAGC CGCTAGAAAT TATGTGCCTT CAGGTCTTGT ACCATACCAT
TCCACCTCGA AGCTACACTC ACACACTTGG CAACTGACCG AAAAATAG
 
Protein sequence
MSTQMAIDLS NTLIVAISAT ALFDLNESEQ YREQLIKKDP LTAAQSFREY MYERENEPLE 
TGAGFPLIEA ILNLNKCAQN TSDSSYQNNA PLVEVVIISK SCPETGIRVL NAIRQRGLCI
TRSAFISGAK VADYIADFKV DLFLTTNRED AQSVADAQIC ACAILDATPV NTFKLDTDQL
RIAFDGDAVL FDDSGELLYK QKGLKAFHDR EAKMADLPIE KGPYADLLIK LSVLQRRLPN
LEAQQPIQIA LVTARNSPAD LRAIKTLRQW GVTVDMAFFL GGLEKTAVLK SFAPHIFFDD
SIQHIEAARN YVPSGLVPYH STSKLHSHTW QLTEK