Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2104 |
Symbol | ipk |
ID | 5206036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2626207 |
End bp | 2627178 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640600344 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_001280994 |
Protein GI | 148653901 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000370412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGT ATGCCAAGCT TAGTTTATTT TCACCGGCGA AAATCAATCT GTTTTTGCAC ATTACCGGTA AAAGAGCAGA TGGCTATCAT AACTTGCAGA CGGTGTTTCG TTTGCTAGAC TGGGGTGATA CCCTAGAGTT CTTGGTCACC CAGGATAGCT TCGATCCTAC AGCGCCGATT AATGAGCAGC ACTTACTGGT TCGCTTAAGT AGCACAGTGG CCATCACCGC ACAGGTGATG GACAACTTGG TCATCAAAGC GGCTGTGGCG CTGCTACAGG CATGGCAAAA CAGTGCCCTC ACACGGTCAT CTGACCCCGC GGTAACCCCT CACCTGCCGG TTATCGAAGT GACGCTCAAC AAAGTTCTAC CAACTGGCGC AGGCCTTGGT GGCGGCTCCT CAAATGCAGC CACTACCTTA ATAGCGCTAA ATAAGCTATG GGGCTTTCAT TATGACATTG AGGCTTTAAT CAAGATTGGC GCAACGGTCG GCGCTGATGT GCCAATTTTT GTGCTTGGGC AAGATGCCAT TGCTGAGGGC ATCGGCGAGC GGCTAACCCC CATCAAGTTG CCACAGCATC AATATTTGCT ATTAAATCCT GCAGCTCATG CAGCAACCCA AGCCCTATTT GCCCACCCTG ACTTGCAGCG CAATGTGCCC GCATTAAGCA TAGATGAGAT AAAAGCGGCA CAATCTTGCT ACTTGCAGCA GCTTAATGCG CCATTTAGCA ATGTATTTGA GCCGGTGGTG ACCAAGTTGG TGCCTGAGGT GAATCAGGCA CTCAATTATC TTAGACAGCT TGAGGCGCTC ACCGGCACCC AAGCACGTAT GACCGGTACC GGCAGCAGTG TATTTTTGCC GATACCTACT GACAAAATCA GCCTCATAAC ACATCACCTT AGCAATGCTG GGGCGCCTTG TGATTATGTA CTGACCCAAA GTTTAGATAA AAACGGGCAA AACCCTGAAT AA
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Protein sequence | MTSYAKLSLF SPAKINLFLH ITGKRADGYH NLQTVFRLLD WGDTLEFLVT QDSFDPTAPI NEQHLLVRLS STVAITAQVM DNLVIKAAVA LLQAWQNSAL TRSSDPAVTP HLPVIEVTLN KVLPTGAGLG GGSSNAATTL IALNKLWGFH YDIEALIKIG ATVGADVPIF VLGQDAIAEG IGERLTPIKL PQHQYLLLNP AAHAATQALF AHPDLQRNVP ALSIDEIKAA QSCYLQQLNA PFSNVFEPVV TKLVPEVNQA LNYLRQLEAL TGTQARMTGT GSSVFLPIPT DKISLITHHL SNAGAPCDYV LTQSLDKNGQ NPE
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