| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2090 |
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| Symbol | |
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| ID | 5204642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2608469 |
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| End bp | 2610364 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640600330 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001280980 |
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| Protein GI | 148653887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.716392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACTT CAAATAATGC TTTAACCACT CAGTACGATC AAGATTTGGC CGTGCATTAC
CATTTGGATT TTGAGCGCTT CACTCAGCAC TTAGTCGAGG TGACTTTAAG CTTCACTGCA
GACAAGTCAG CGCCTGTGCT GTGGCTGCCA GCTTGGATTC CAGGCAGTTA TTTGATGCGT
GAATTTGCGC GTAATATTAC CGCAGTGCAG TATCACGTTG TTGGCAAAGA TGAGAGATAC
AGAGCGCAAA AGCTGAGTAA AAACGAGTGG CAATTGCCCA AAATTACGGC TGGTGAGAAG
GTAGAGGTGC GCTATGAGGT GTACTGCTAT GACTTATCAG TACGTACCGC TTATGTTGAT
CAAACCCGTT TGTATGGCAA CTTTACTTCA TTGGCCTTGG CGATAGAGGG GCAAGAGGCG
TTACCTGTGG CGGTGACTTT AAGCGTGCCG CAGGCCTTTT ATGACGCGCA AGCTAAGGGT
GCAGAGCCGG TAAAAATTGC CTGTGGTCTT AAGCATCGCT ATCTGCATAC AGATCATGTC
CATTATTATC AGCTTAGTGC TGAGAGTTAT CCTGAGCTTA TCGACTATCC TTTTGAAATC
GCGCCGCAAT CTGAGTTTGA TTTTATTGTT CAAGACAATA AGCACAATAC CACGGTGCAT
CATTTTTATA TCTCAGGTAA GCACAGCGCC AACATGGGCC GCTTGCAGCA AGATGTGACT
CAGATTTGTC AAAGCTATGT CAGCTGGCTC GGAGATGCAC CTTTTAGTGG TGAGGATTAT
GAGGGCTATA CTTTCATGAC CTATGCCAGT GGCAACGATT ACGGCGGCCT TGAGCATATT
AACTCTACCA GCTTGGTGAG CCCGCGTAGT GATTTACCGT CCGCTCAAGA GCCACAACAG
CCGAGCGAAA GCTATCAGCG CTTTTTGGGA TTGTGCAGCC ATGAGTATTT TCATGCTTGG
TGGGTGAAGA CCGTACGCCC TGATGTGATG ATGGCTGTGG ATTTACGCCG TGAGGCTTAT
ACGCCGCTGC TGTGGGTATT TGAGGGGTTT ACCTCATATA TTGATGACTT TATGCTCCAA
GCTTCAGGGG TTATCAATCA GCAAAGCTAT CTAAAGCTGC TACAAAACCA AATTAACCGC
TATAACCAAA CGCCAGGACG CGCTTTACAA AGTGTGGCAG AGTCCAGCTT CGATGCTTGG
ATTAAGCTAT ACCGCGCTGA TGAAAATACG GGTAATGCCG GTATTAGTTA CTATAACAAA
GGGGCCTTGG TGGCTTTATG TTTGGATTTA ACACTGATGC AGCAAAGCGG TGGCAAGCAT
CGTTTGTTTG ATGTGGTAAA AGCTTTTTAT GAGCAAGCCA AGGCTCAAGG CGCAGCGGGC
AATCGCATTC GTATCGGTAT GAATAACGAT AACCTAGAGG CGGTCATCAG CCAATTTATG
GACAACGCCA TTTGGCAAGA GTTCAAGGCA CGCTATGTCG ATGGTGTAGA GGCGTTGCCT
ATTTATGAGC TGCTAGAGGC TAATGGCATT AAGATCACTC AAGACAGCCG AGACAACAGC
TTAGCGTGGG GTATTAGCGT TACTGAAAGT GCTGAGGGCT TGCAAGTCAC CAAAGTGCTG
CGTGACAGTG TGGCCGCTGA AGCAGGTCTC TCTGCTAAAG ACGTCATTGT GGCGATTGAC
GGTATTAAAG CCACCAAAAA ACAGCTACAA ACTGTGGCGG AGTCAGGGCT TGATAGCGTG
AGCTGTCATG CATTTCGCCG TGATGAGCTG TTGAGCTTTG AGGTGAGTCA CCAAACCCAG
TCAGGGGTGA GTGCCAATCC AAGTTTAGAG AAGATTAGTT TAAGTTTAGG CGACTCAGGC
TTTGAGCACT GGTTAACACC AGATTTTATA CGGTAG
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| Protein sequence | MTTSNNALTT QYDQDLAVHY HLDFERFTQH LVEVTLSFTA DKSAPVLWLP AWIPGSYLMR
EFARNITAVQ YHVVGKDERY RAQKLSKNEW QLPKITAGEK VEVRYEVYCY DLSVRTAYVD
QTRLYGNFTS LALAIEGQEA LPVAVTLSVP QAFYDAQAKG AEPVKIACGL KHRYLHTDHV
HYYQLSAESY PELIDYPFEI APQSEFDFIV QDNKHNTTVH HFYISGKHSA NMGRLQQDVT
QICQSYVSWL GDAPFSGEDY EGYTFMTYAS GNDYGGLEHI NSTSLVSPRS DLPSAQEPQQ
PSESYQRFLG LCSHEYFHAW WVKTVRPDVM MAVDLRREAY TPLLWVFEGF TSYIDDFMLQ
ASGVINQQSY LKLLQNQINR YNQTPGRALQ SVAESSFDAW IKLYRADENT GNAGISYYNK
GALVALCLDL TLMQQSGGKH RLFDVVKAFY EQAKAQGAAG NRIRIGMNND NLEAVISQFM
DNAIWQEFKA RYVDGVEALP IYELLEANGI KITQDSRDNS LAWGISVTES AEGLQVTKVL
RDSVAAEAGL SAKDVIVAID GIKATKKQLQ TVAESGLDSV SCHAFRRDEL LSFEVSHQTQ
SGVSANPSLE KISLSLGDSG FEHWLTPDFI R
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