| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2087 |
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| Symbol | |
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| ID | 5204639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2604875 |
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| End bp | 2607097 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600327 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001280977 |
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| Protein GI | 148653884 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAA TTATATATAC CAAAACCGAC GAAGCCCCAG CGCTGGCCAC GCAGTCATTT
TTACCCATTG TACAAGCATT TACGCATAGT GCCGACATTG AAGTTGAAGT CAGTGATATC
TCATTAGCCG CCCGTATTTT GGCACTTTTT CCAGAGTATC TAAACCCCGA GCAGCAAGTG
CCTGATGCAC TTACCGAGCT TGGCCAATTA GTGCTAAAGC CTGACGCCAA TATCATCAAA
TTACCCAATA TCAGCGCCTC TATTCCTCAG CTAAAAGCAG CCATTAAAGA GCTACAAGAC
AAAGGCTTTG CGGTGCCTGA CTTCCCAGAT ACCTCCAGCA CCGATAAAGA AAAAGAAGTG
CGGGCCCGTT TTGATAAAAT CAAAGGCAGT GCGGTAAATC CGGTACTACG TGAAGGTAAC
TCAGACAGAC GCGCCCCAAA AGCGGTGAAA GCCTATGCCC GAGCCAATCC ACATGCCATG
AAGCCTTGGC GCCGTGACTC AAAAACTCAT GTATCTACCA TGGCACATTG TGACTTCGTT
GATGACGAAA AGTCAGTGAC CATCGATAAA GAAACCAAGT ACCGTGTGGT CTATACCGAT
GAGACCGGTA CAGCTACCGA GCTTAAATCG CCTGCTCCGC TATTAAAGGG GGAGCTGATG
GACACCTCTA TCTTATGTTT TGATGTGCTA AGCAATTTCT TACAAGAACA AGTGCAAGAT
GCCAAGGCAC AGGGCCTGTT ATTCTCTATT CATCTAAAAG CGACTATGAT GAAAGTGTCT
GACCCAATCA TCTTTGGTGA GGCGGTGCGA GTTTATTTTA AAGACTTGTT TGCCAAACAC
GGTGAGACTT TTGACAAGCT CGGTGTCAAC GTCAACAATG GCTTTGCCCA GTTGCTGTCC
AAGATTCAAG AGCTGCCAGA TGATCAGCGT CAACAGATAG AGGCGGATAT TCAACAGGTA
TATGACACCA ATCCGCCACT GGCCATGGTC GATTCAGACA AAGGCATTAC CAACTTGCAT
GTGCCAAGTG ATGTCATTGT CGATGCCTCT ATGCCAGCGA TGATCCGTAA CGGTGGTCAA
ATGTGGGGCC CTGATGGCAA GCTACATGAT GTGAATGCAG TAATCCCCGA CAGCAGTTAT
GCCGCTCTTT ATGATGAGAC CATCCGCTTT TGTAAAGAGC ATGGTGCCTT TGACCCCACC
ACCATGGGCA CTGTACCCAA TATTGGCCTT ATGGCTCAAA AAGCCGAAGA GTATGGCTCG
CATGACACCA CTTTTCAGAT GCCAGGCAAA GGAAAAATCC AAGTCATCGA TGCCGATGGC
AACGTGCTGA CTGAGCATGC GGTCAAAAAA GATGACATCT GGCGCATGAA CCGTGTCAAA
GATGCCCCTA TCCAAGACTG GGTAAAACTT GCAGTGACCC GTGCCCGAGC CAGCGGCATG
CCGGCCGTTT TCTGGCTGGA TAAAAACCGG GCTCACCACG CCGCCTTAAT CGAAAAAGTC
GAGTTGTACC TAAAAGACCA TGACACCGAA GGCTTAGAAA TTCATATCAT GCCCATTCGT
GAAGCAACCC GATTTACGCT TGAGCGTCTG ATCGCTGGCA AGGATACGCT GTCAGTCACC
GGCAACGTAT TGCGTGATTA TCTGACCGAT TTATTTCCCA TCCTTGAGCT GGGTACCAGT
GCTAAGATGC TATCTATCGT GCCGCTTATG AACGGTGGCG GCCTGTTTGA AACCGGTGCC
GGTGGTTCAG CGCCCAAACA TGTGCAGCAG CTGCTGGAGC AAAATCATCT ACGCTGGGAT
TCACTGGGAG AGTTTTTGGC ATTGACTGTG TCACTTGAGC ACGAAGCTGA GCATGGCACC
GCACAAAACC CAAAAGCGCA AATCCTAGCC GATACTTTAA GCGATGCCAC CGAGAAGCTC
CTGCTAAACA ACAAGTCACC TTCACGTAAA GTGGGTGAGT TGGACAACCG CGGCAGCCAT
TTTTACTTGG CCATGTACTG GGCTCAAGCA TTGGCCAAGC AAGACCAAGA TGCCAGCCTA
CAACAAAGAT TTGCGCCACT GGCTAAAGCA CTTGCCGATA ATGAGGATAC TATCGTCAAA
GAGCTTAATG AGGTGCAAGG TCATCAAGTG GACATTGAGG GTTACTATCT GCCCAATGAT
GAGGTTGTAA AGCAGGTGAT GCGCCCAAGC CAAACCTTCA ATAAGATTTT AGCTGCGCTA
TAA
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| Protein sequence | MSKIIYTKTD EAPALATQSF LPIVQAFTHS ADIEVEVSDI SLAARILALF PEYLNPEQQV
PDALTELGQL VLKPDANIIK LPNISASIPQ LKAAIKELQD KGFAVPDFPD TSSTDKEKEV
RARFDKIKGS AVNPVLREGN SDRRAPKAVK AYARANPHAM KPWRRDSKTH VSTMAHCDFV
DDEKSVTIDK ETKYRVVYTD ETGTATELKS PAPLLKGELM DTSILCFDVL SNFLQEQVQD
AKAQGLLFSI HLKATMMKVS DPIIFGEAVR VYFKDLFAKH GETFDKLGVN VNNGFAQLLS
KIQELPDDQR QQIEADIQQV YDTNPPLAMV DSDKGITNLH VPSDVIVDAS MPAMIRNGGQ
MWGPDGKLHD VNAVIPDSSY AALYDETIRF CKEHGAFDPT TMGTVPNIGL MAQKAEEYGS
HDTTFQMPGK GKIQVIDADG NVLTEHAVKK DDIWRMNRVK DAPIQDWVKL AVTRARASGM
PAVFWLDKNR AHHAALIEKV ELYLKDHDTE GLEIHIMPIR EATRFTLERL IAGKDTLSVT
GNVLRDYLTD LFPILELGTS AKMLSIVPLM NGGGLFETGA GGSAPKHVQQ LLEQNHLRWD
SLGEFLALTV SLEHEAEHGT AQNPKAQILA DTLSDATEKL LLNNKSPSRK VGELDNRGSH
FYLAMYWAQA LAKQDQDASL QQRFAPLAKA LADNEDTIVK ELNEVQGHQV DIEGYYLPND
EVVKQVMRPS QTFNKILAAL
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