Gene PsycPRwf_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2068 
Symbol 
ID5205431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2578914 
End bp2580704 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content47% 
IMG OID640600308 
ProductAMP-binding domain protein 
Protein accessionYP_001280958 
Protein GI148653865 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCT CTACCTCTTT TTCACATCCC TCCAATAACA TCGATTCTTC CTCTGTTTCT 
ATAGATTTAG ATACGGTCCC TCGCATTAGT ATGGGCGCCA AATCGAGCAA TGCGCCGCTT
AAGCTGAGCC AAGATCAAGG CCCTCAGACG GCATTAATCG AAGTCACTAT TGGTGACTTT
TTTGATGCCG TGGTAGAAAA ATATCCCGAT CAAGAAGCCC TAGTGGTGTG CCATCAAGGC
ATACGTTGGA CTTACCGTGA GCTGCAACAA AAAGTCAATC AACTGGCCAG CGCTATGATT
GAAATGGGTC TGGAGATTGG TGATCGCGTT GGTATCTGGT CACATAACAA CGCTGAATGG
CTGCTTATGC AATTGGCCAC TGCCAAGGTA GGCGTGATTT TAGTAAATAT TAACCCCGCC
TACCGTAGCT TTGAGCTGCA ATATGCGCTA AATAAATTGG GCTGCTCAGC TTTGGTGCTT
ATGCGCCATT TCAAAACCAG TGATTATGCC AATATCATTC GCGAATTATG TCCTGAGATT
TATCACAAGC AGTACACTCA ATTAGATTTG GTTGAGATAC CTACTGTTGA GCGTATTATC
TGGATTGATG AGCCAGACAC GGATGAAGAA TTTGGCTTTA TGCAAAAATT CTCAGAGTGG
ATGAAAGAGG GCGATGCTAA TGATCCACGA GTGGCTGAGC GTCAGGCCAA ATTAAAAAAT
ACTGATCCCA TCAACGTTCA GTTCACCAGT GGCACCACAG GTACCCCAAA AGGGGCAACC
TTGACGCATC GCAATATCTT AAACAATGGC TATTTTATTG GCGAGGCGAT GGATTTAGGG
CCTGAGGATC GCTTATGTAT CCCAGTGCCG CTATACCACT GCTTTGGTAT GGTGCTTGGT
AACCTTGCGA TTTTGACCCA TGGCGGCTGT ATTGTCTATC CCAATGATGG CTTCGAGCCG
CTTAGCGTGT TGCAAGCGGT ACAAGATGAG AAATGCACCG CACTGCACGG TGTGCCCACC
ATGTTTATTG CGGAGCTTGA TCACCCAGAC TTTGGCAAAT ACGATTTGTC GACCCTTCGT
ACTGGTATCA TGGCCGGCTC AAGCTGCCCC ATTGAGGTGA TGCGCCGCGT CATCGATGAG
ATGCACATGA GCGAGGTCAC CATCGCTTAC GGCATGACCG AGACCAGCCC CGTATCTTGT
CAGACCAACA AACACACCCC GCTTGATAAG CAAGTCTCTA CTGTGGGCTT AGTGCAGCCT
AATTTAGAGG TGAAAATTGT CGATACCCAG ACCGGAGAGG TAGTGCCTAT CGGTGAAACA
GGTGAGCTAT TAACCCGTGG CTATTCGGTG ATGAAAGGCT ATTGGGGCAG CCGCTTTAAG
ACCCGTGAAG CCATTCAAGA TGGCTGGATG CACACCGGCG ACTTAGCCAC CATGGATGAA
GATGGTTATA TTAAAGTGGT TGGCCGCAGC AAAGATATGG TCATCCGCGG CGGTGAAAAC
ATCTATCCGG TAGAAATTGA GAACTATTTA TACCGCCATC CAAAGATTAG TGACGTGCAA
GTTGTGGGCG TTCCGGATAA AAAATATGGC GAGGTACTGG CAGCCTGGAT TATTGCTAGA
AAAGGCGAGC AGCTGACAGA AGATGAGGTT AAGCAGTTTT GTAAAGACAA CATCGCGCAT
TACAAAGTGC CACAGTACTT CCGCTTTGTT GAAGAGTACC CGATGACCAT TACCGGTAAA
ATCCAAAAAT ACAAGATCAC GGAAATGATG ATTGAAGAGC TGGGATTATA A
 
Protein sequence
MFGSTSFSHP SNNIDSSSVS IDLDTVPRIS MGAKSSNAPL KLSQDQGPQT ALIEVTIGDF 
FDAVVEKYPD QEALVVCHQG IRWTYRELQQ KVNQLASAMI EMGLEIGDRV GIWSHNNAEW
LLMQLATAKV GVILVNINPA YRSFELQYAL NKLGCSALVL MRHFKTSDYA NIIRELCPEI
YHKQYTQLDL VEIPTVERII WIDEPDTDEE FGFMQKFSEW MKEGDANDPR VAERQAKLKN
TDPINVQFTS GTTGTPKGAT LTHRNILNNG YFIGEAMDLG PEDRLCIPVP LYHCFGMVLG
NLAILTHGGC IVYPNDGFEP LSVLQAVQDE KCTALHGVPT MFIAELDHPD FGKYDLSTLR
TGIMAGSSCP IEVMRRVIDE MHMSEVTIAY GMTETSPVSC QTNKHTPLDK QVSTVGLVQP
NLEVKIVDTQ TGEVVPIGET GELLTRGYSV MKGYWGSRFK TREAIQDGWM HTGDLATMDE
DGYIKVVGRS KDMVIRGGEN IYPVEIENYL YRHPKISDVQ VVGVPDKKYG EVLAAWIIAR
KGEQLTEDEV KQFCKDNIAH YKVPQYFRFV EEYPMTITGK IQKYKITEMM IEELGL