Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2068 |
Symbol | |
ID | 5205431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2578914 |
End bp | 2580704 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600308 |
Product | AMP-binding domain protein |
Protein accession | YP_001280958 |
Protein GI | 148653865 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGCT CTACCTCTTT TTCACATCCC TCCAATAACA TCGATTCTTC CTCTGTTTCT ATAGATTTAG ATACGGTCCC TCGCATTAGT ATGGGCGCCA AATCGAGCAA TGCGCCGCTT AAGCTGAGCC AAGATCAAGG CCCTCAGACG GCATTAATCG AAGTCACTAT TGGTGACTTT TTTGATGCCG TGGTAGAAAA ATATCCCGAT CAAGAAGCCC TAGTGGTGTG CCATCAAGGC ATACGTTGGA CTTACCGTGA GCTGCAACAA AAAGTCAATC AACTGGCCAG CGCTATGATT GAAATGGGTC TGGAGATTGG TGATCGCGTT GGTATCTGGT CACATAACAA CGCTGAATGG CTGCTTATGC AATTGGCCAC TGCCAAGGTA GGCGTGATTT TAGTAAATAT TAACCCCGCC TACCGTAGCT TTGAGCTGCA ATATGCGCTA AATAAATTGG GCTGCTCAGC TTTGGTGCTT ATGCGCCATT TCAAAACCAG TGATTATGCC AATATCATTC GCGAATTATG TCCTGAGATT TATCACAAGC AGTACACTCA ATTAGATTTG GTTGAGATAC CTACTGTTGA GCGTATTATC TGGATTGATG AGCCAGACAC GGATGAAGAA TTTGGCTTTA TGCAAAAATT CTCAGAGTGG ATGAAAGAGG GCGATGCTAA TGATCCACGA GTGGCTGAGC GTCAGGCCAA ATTAAAAAAT ACTGATCCCA TCAACGTTCA GTTCACCAGT GGCACCACAG GTACCCCAAA AGGGGCAACC TTGACGCATC GCAATATCTT AAACAATGGC TATTTTATTG GCGAGGCGAT GGATTTAGGG CCTGAGGATC GCTTATGTAT CCCAGTGCCG CTATACCACT GCTTTGGTAT GGTGCTTGGT AACCTTGCGA TTTTGACCCA TGGCGGCTGT ATTGTCTATC CCAATGATGG CTTCGAGCCG CTTAGCGTGT TGCAAGCGGT ACAAGATGAG AAATGCACCG CACTGCACGG TGTGCCCACC ATGTTTATTG CGGAGCTTGA TCACCCAGAC TTTGGCAAAT ACGATTTGTC GACCCTTCGT ACTGGTATCA TGGCCGGCTC AAGCTGCCCC ATTGAGGTGA TGCGCCGCGT CATCGATGAG ATGCACATGA GCGAGGTCAC CATCGCTTAC GGCATGACCG AGACCAGCCC CGTATCTTGT CAGACCAACA AACACACCCC GCTTGATAAG CAAGTCTCTA CTGTGGGCTT AGTGCAGCCT AATTTAGAGG TGAAAATTGT CGATACCCAG ACCGGAGAGG TAGTGCCTAT CGGTGAAACA GGTGAGCTAT TAACCCGTGG CTATTCGGTG ATGAAAGGCT ATTGGGGCAG CCGCTTTAAG ACCCGTGAAG CCATTCAAGA TGGCTGGATG CACACCGGCG ACTTAGCCAC CATGGATGAA GATGGTTATA TTAAAGTGGT TGGCCGCAGC AAAGATATGG TCATCCGCGG CGGTGAAAAC ATCTATCCGG TAGAAATTGA GAACTATTTA TACCGCCATC CAAAGATTAG TGACGTGCAA GTTGTGGGCG TTCCGGATAA AAAATATGGC GAGGTACTGG CAGCCTGGAT TATTGCTAGA AAAGGCGAGC AGCTGACAGA AGATGAGGTT AAGCAGTTTT GTAAAGACAA CATCGCGCAT TACAAAGTGC CACAGTACTT CCGCTTTGTT GAAGAGTACC CGATGACCAT TACCGGTAAA ATCCAAAAAT ACAAGATCAC GGAAATGATG ATTGAAGAGC TGGGATTATA A
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Protein sequence | MFGSTSFSHP SNNIDSSSVS IDLDTVPRIS MGAKSSNAPL KLSQDQGPQT ALIEVTIGDF FDAVVEKYPD QEALVVCHQG IRWTYRELQQ KVNQLASAMI EMGLEIGDRV GIWSHNNAEW LLMQLATAKV GVILVNINPA YRSFELQYAL NKLGCSALVL MRHFKTSDYA NIIRELCPEI YHKQYTQLDL VEIPTVERII WIDEPDTDEE FGFMQKFSEW MKEGDANDPR VAERQAKLKN TDPINVQFTS GTTGTPKGAT LTHRNILNNG YFIGEAMDLG PEDRLCIPVP LYHCFGMVLG NLAILTHGGC IVYPNDGFEP LSVLQAVQDE KCTALHGVPT MFIAELDHPD FGKYDLSTLR TGIMAGSSCP IEVMRRVIDE MHMSEVTIAY GMTETSPVSC QTNKHTPLDK QVSTVGLVQP NLEVKIVDTQ TGEVVPIGET GELLTRGYSV MKGYWGSRFK TREAIQDGWM HTGDLATMDE DGYIKVVGRS KDMVIRGGEN IYPVEIENYL YRHPKISDVQ VVGVPDKKYG EVLAAWIIAR KGEQLTEDEV KQFCKDNIAH YKVPQYFRFV EEYPMTITGK IQKYKITEMM IEELGL
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