Gene PsycPRwf_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2061 
Symbol 
ID5205424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2569612 
End bp2571000 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content50% 
IMG OID640600301 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001280951 
Protein GI148653858 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAA CCCGTTACGA ATGCCAAGCC TGTGGCTGGA TTTATCCCGC TCAGTCTGAA 
TCTGCCAACC CAGAGCCCAT CGCCTTTAAT GAGTTGCCTG ACACCTTTTG CTGCCCGCTA
TGCGGCGTAG CCAAAGCGCA GTTTAAGCCA TTAGACGTAG ATGAAACACC AGGTGCTGCT
ACCTTAACCT CTAGCATGCA AAACAGCTCA CAGCAGTGTC AAGATGTGGT AGTCGTGGGC
GCTGGCCTCG CAGGCTGGAC GGTGATTGAT GCGCTGCGTG CCAAGCAGCC AGATATTGGC
ATTACTTTAA TCACTCAAGA TATGGCCGAT AGATATCATA AGCCGATGCT GTCGGTGGCG
TTAAGTCAAA ACAAAACCCC ACAAGACTTG GTGCGTATGA GTGGGGTACA AGCAGCCCAA
AAGGCTAATA TCACCCTAAT GAGCCAGACA CAAGTTATCA GTATCGATAG CAAAAATCGT
ACTTTACAGA CGGATAAAGG TGAGCTTAGC TATGGCAATC TAGTGTTGGC ACTCGGTGCC
GCACCTGCCA TACCTGCTTG CTTTGCAGAT CAGGATATTT GGCACATCAA TGATCTTGAA
GGCTTTAGCA AAATTCAGGC CGCCCTTGCT GGCGAGACTG GTGCAAACAA ACACATTGCG
GTGATTGGCG CTGGCATGAT AGGCACTGAG ATAGCAGAAG ACTTGACCAC TGCAGGCCAT
AAGGTGACGT TACTCGACAT CAATGACGCA CCACTGGCGG GTCTATTACC GCCACTGGCC
ACCGATAAAA TTCTGCAGGC GCTACACAAG CAAGACATTA CCTTCTTAGG CGGTCATCTG
GTACAAAGTG CGGCACCCCG CAGTGAAGGC GGTTATCAGC TGACTATAAA AAACTGCCAA
AGCGGGGAGA GCCAAAACCT GCAGGTGGAT CACTTATTAA TCAGTACCGG CCTAAAGGTA
GCCGATACTC TGCCGCTGAG TGCTGGCCTA GATTTTGATG TACACGCAGG CATTATTGTA
GATGAGGCCA ATCTGCAAAG TAGTGTGCCT CATATCTACG CGATAGGCGA CTGTATGTCT
ATTGATGGTG TGCCTTGCCG CTATGTGGCT CCATTACGTG CTCAAGCGGC CAGTATTGTA
GAGCATATCT TAGGTCAGCA GCAGCAAGAT TATCAGCATC AAGCTTACGA GCATAAGCCC
CCTATGATTC GCCTAAAAAA CAAAAGCATC TCAGTCAGTG CCACCGGTAC CCCAAGCGCC
GATGAATCAC GAGGTGTCTG GCAGGTTATC AGTGATACTG AGTCGGATAG CGGGCACGAG
CTGGTGCTGG CCCAAGTAGC TGATAATGGT GAGCAGATAG CCAAGGTGAC TTTAAAAACA
CCGCATTAA
 
Protein sequence
MSVTRYECQA CGWIYPAQSE SANPEPIAFN ELPDTFCCPL CGVAKAQFKP LDVDETPGAA 
TLTSSMQNSS QQCQDVVVVG AGLAGWTVID ALRAKQPDIG ITLITQDMAD RYHKPMLSVA
LSQNKTPQDL VRMSGVQAAQ KANITLMSQT QVISIDSKNR TLQTDKGELS YGNLVLALGA
APAIPACFAD QDIWHINDLE GFSKIQAALA GETGANKHIA VIGAGMIGTE IAEDLTTAGH
KVTLLDINDA PLAGLLPPLA TDKILQALHK QDITFLGGHL VQSAAPRSEG GYQLTIKNCQ
SGESQNLQVD HLLISTGLKV ADTLPLSAGL DFDVHAGIIV DEANLQSSVP HIYAIGDCMS
IDGVPCRYVA PLRAQAASIV EHILGQQQQD YQHQAYEHKP PMIRLKNKSI SVSATGTPSA
DESRGVWQVI SDTESDSGHE LVLAQVADNG EQIAKVTLKT PH